Q8I4D9 (Q8I4D9_CAEEL) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 70.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Protein UNC-25, isoform c EMBL CAD45606.2 | ||||
| Gene names |
| ||||
| Organism | Caenorhabditis elegans [Reference proteome] EMBL CAD45606.2 | ||||
| Taxonomic identifier | 6239 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis![]() |
Protein attributes
| Sequence length | 433 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Cofactor | Pyridoxal phosphate By similarity. RuleBase RU000382 |
| Sequence similarities | Belongs to the group II decarboxylase family. RuleBase RU000382 |
Ontologies
| Keywords | |
|---|---|
| Ligand | Pyridoxal phosphate RuleBase RU000382 |
| Molecular function | Lyase RuleBase RU000382 |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | gamma-aminobutyric acid biosynthetic process Inferred from sequence or structural similarity PubMed 9880574. Source: WormBase synaptic transmission, GABAergicInferred from genetic interaction PubMed 16996038. Source: WormBase |
| Cellular_component | axon Inferred from direct assay PubMed 9880574. Source: WormBase inhibitory synapseInferred from direct assay PubMed 9880574. Source: WormBase neuronal cell bodyInferred from direct assay PubMed 9880574. Source: WormBase synaptic vesicleInferred from direct assay PubMed 9880574. Source: WormBase |
| Molecular_function | glutamate decarboxylase activity Inferred from sequence or structural similarity PubMed 9880574. Source: WormBase pyridoxal phosphate bindingInferred from sequence or structural similarity PubMed 9880574. Source: WormBase |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Genome sequence of the nematode C. elegans: a platform for investigating biology." Caenorhabditis elegans Sequencing Consortium Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2 EMBL CAD45606.2. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AL032626 Genomic DNA. Translation: CAD45606.2. |
| RefSeq | NP_001022832.1. NM_001027661.2. |
| UniGene | Cel.7826. |
3D structure databases | |
| ProteinModelPortal | Q8I4D9. |
| SMR | Q8I4D9. Positions 12-432. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q8I4D9. |
Proteomic databases | |
| PaxDb | Q8I4D9. |
| PRIDE | Q8I4D9. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblMetazoa | Y37D8A.23c; Y37D8A.23c; Y37D8A.23. |
| GeneID | 176713. |
| KEGG | cel:CELE_Y37D8A.23. |
| UCSC | Y37D8A.23a. c. elegans. |
Organism-specific databases | |
| CTD | 176713. |
| WormBase | Y37D8A.23c; CE32012; WBGene00006762; unc-25. |
Phylogenomic databases | |
| eggNOG | COG0076. |
| GeneTree | ENSGT00550000074275. |
| HOGENOM | HOG000005382. |
| KO | K01580. |
Gene expression databases | |
| ArrayExpress | Q8I4D9. |
Family and domain databases | |
| Gene3D | 3.40.640.10. 1 hit. 3.90.1150.10. 1 hit. |
| InterPro | IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view] |
| Pfam | PF00282. Pyridoxal_deC. 1 hit. [Graphical view] |
| SUPFAM | SSF53383. PyrdxlP-dep_Trfase_major. 1 hit. |
| ProtoNet | Search... |
Other | |
| NextBio | 893696. |
Entry information
| Entry name | Q8I4D9_CAEEL | ||||||||
| Accession | Primary (citable) accession number: Q8I4D9 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
