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Q8GZD5 (Q8GZD5_9ROSI) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.4.1.207 EMBL AAN87142.1
Gene names
Name:XET16A EMBL AAN87142.1
OrganismPopulus tremula x Populus tremuloides EMBL AAN87142.1
Taxonomic identifier47664 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus

Protein attributes

Sequence length294 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential EMBL AAN87142.1
Chain23 – 294272xyloglucan endotransglycosylase EMBL AAN87142.1
PRO_5000063345

Regions

Region134 – 1363Galactose binding

Sites

Active site1071Nucleophile
Active site1111Proton donor/acceptor
Site1091Important for catalytic activity

Amino acid modifications

Glycosylation1151N-linked (GlcNAc...) PDB 1UN1 PDB 1UMZ

Sequences

Sequence LengthMass (Da)Tools
Q8GZD5 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 168017205AF55A4D

FASTA29434,218
        10         20         30         40         50         60 
MAAAYPWTLF LGMLVMVSGT MGAALRKPVD VAFGRNYVPT WAFDHIKYFN GGNEIQLHLD 

        70         80         90        100        110        120 
KYTGTGFQSK GSYLFGHFSM QMKLVPGDSA GTVTAFYLSS QNSEHDEIDF EFLGNRTGQP 

       130        140        150        160        170        180 
YILQTNVFTG GKGDREQRIY LWFDPTKEFH YYSVLWNMYM IVFLVDDVPI RVFKNCKDLG 

       190        200        210        220        230        240 
VKFPFNQPMK IYSSLWNADD WATRGGLEKT DWSKAPFIAS YRSFHIDGCE ASVEAKFCAT 

       250        260        270        280        290 
QGARWWDQKE FQDLDAFQYR RLSWVRQKYT IYNYCTDRSR YPSMPPECKR DRDI 

« Hide

References

[1]"Xyloglucan endotransglycosylases have a function during the formation of secondary cell walls of vascular tissues."
Bourquin V., Nishikubo N., Abe H., Brumer H., Denman S., Eklund M., Christiernin M., Teeri T.T., Sundberg B., Mellerowicz E.J.
Plant Cell 14:3073-3088(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]Denman S.E., Eklund M., Teeri T.T.
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Crystal structures of a poplar xyloglucan endotransglycosylase reveal details of transglycosylation acceptor binding."
Johansson P., Brumer H., Baumann M.J., Kallas A.M., Henriksson H., Denman S.E., Teeri T.T., Jones T.A.
Plant Cell 16:874-886(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 23-294 IN COMPLEX WITH GALACTOSE, GLYCOSYLATION AT ASN-115.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF515607 mRNA. Translation: AAN87142.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1UMZX-ray1.80A/B23-294[»]
1UN1X-ray2.10A/B23-294[»]
ProteinModelPortalQ8GZD5.
SMRQ8GZD5. Positions 28-294.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH16. Glycoside Hydrolase Family 16.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Enzyme and pathway databases

BRENDA2.4.1.207. 275963.

Family and domain databases

Gene3D2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR000757. Glyco_hydro_16.
IPR008263. Glycoside_hydrolase_16_AS.
IPR016455. XET.
IPR010713. XET_C.
[Graphical view]
PfamPF00722. Glyco_hydro_16. 1 hit.
PF06955. XET_C. 1 hit.
[Graphical view]
PIRSFPIRSF005604. XET. 1 hit.
SUPFAMSSF49899. SSF49899. 1 hit.
PROSITEPS01034. GLYCOSYL_HYDROL_F16. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ8GZD5.

Entry information

Entry nameQ8GZD5_9ROSI
AccessionPrimary (citable) accession number: Q8GZD5
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: February 19, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)