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Protein

Protein Brevis radix-like 4

Gene

BRXL4

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein Brevis radix-like 4
Short name:
AtBRXL4
Gene namesi
Name:BRXL4
Ordered Locus Names:At5g20540
ORF Names:F7C8.130
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G20540
TAIRilocus:2149897 AT5G20540

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003738251 – 384Protein Brevis radix-like 4Add BLAST384

Proteomic databases

PaxDbiQ8GZ92

PTM databases

iPTMnetiQ8GZ92

Expressioni

Tissue specificityi

Expressed in roots.1 Publication

Gene expression databases

ExpressionAtlasiQ8GZ92 baseline and differential
GenevisibleiQ8GZ92 AT

Structurei

3D structure databases

ProteinModelPortaliQ8GZ92
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini150 – 205BRX 1PROSITE-ProRule annotationAdd BLAST56
Domaini329 – 384BRX 2PROSITE-ProRule annotationAdd BLAST56

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi69 – 72Poly-Ser4
Compositional biasi104 – 107Poly-Gln4
Compositional biasi261 – 325Ser-richAdd BLAST65

Sequence similaritiesi

Belongs to the BRX family.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG410IVIB Eukaryota
ENOG41116VM LUCA
HOGENOMiHOG000240563
InParanoidiQ8GZ92
OMAiWSENCEK
OrthoDBiEOG09360FGB
PhylomeDBiQ8GZ92

Family and domain databases

InterProiView protein in InterPro
IPR013591 Brevis_radix_dom
IPR027988 BRX_N
PfamiView protein in Pfam
PF08381 BRX, 2 hits
PF13713 BRX_N, 1 hit
PROSITEiView protein in PROSITE
PS51514 BRX, 2 hits

Sequencei

Sequence statusi: Complete.

Q8GZ92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTCIARSKR AGDESSGQPD DPDSKNAKSL TSQLKDMALK ASGAYRHCTP
60 70 80 90 100
CTAAQGQGQG QGPIKNNPSS SSVKSDFESD QRFKMLYGRS NSSITATAAV
110 120 130 140 150
AATQQQQPRV WGKEMEARLK GISSGEATPK SASGRNRVDP IVFVEEKEPK
160 170 180 190 200
EWVAQVEPGV LITFVSLPGG GNDLKRIRFS RDMFNKLQAQ RWWADNYDKV
210 220 230 240 250
MELYNVQKLS RQAFPLPTPP RSEDENAKVE YHPEDTPATP PLNKERLPRT
260 270 280 290 300
IHRPPGLAAY SSSDSLDHNS MQSQQFYDSG LLNSTPKVSS ISVAKTETSS
310 320 330 340 350
IDASIRSSSS RDADRSEEMS VSNASDVDNE WVEQDEPGVY ITIKVLPGGK
360 370 380
RELRRVRFSR ERFGEMHARL WWEENRARIH EQYL
Length:384
Mass (Da):42,883
Last modified:March 1, 2003 - v1
Checksum:i2C6C38B71B592BCF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF296833 Genomic DNA No translation available.
CP002688 Genomic DNA Translation: AED92856.1
AK117133 mRNA Translation: BAC41811.1
RefSeqiNP_197554.2, NM_122061.4
UniGeneiAt.49043

Genome annotation databases

EnsemblPlantsiAT5G20540.1; AT5G20540.1; AT5G20540
GeneIDi832176
GrameneiAT5G20540.1; AT5G20540.1; AT5G20540
KEGGiath:AT5G20540

Similar proteinsi

Entry informationi

Entry nameiBRXL4_ARATH
AccessioniPrimary (citable) accession number: Q8GZ92
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: March 1, 2003
Last modified: April 25, 2018
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health