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Protein

COBRA-like protein 7

Gene

COBL7

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
COBRA-like protein 7
Gene namesi
Name:COBL7
Synonyms:SEB1
Ordered Locus Names:At4g16120
ORF Names:dl4100c
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G16120
TAIRilocus:2130100 AT4G16120

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_000000558127 – 637COBRA-like protein 7Add BLAST611
PropeptideiPRO_0000005582638 – 661Removed in mature formCuratedAdd BLAST24

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi31N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi64N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi122N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi170N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi314N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi327N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi356N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi369N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi398N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi410N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi430N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi472N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi551N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi561N-linked (GlcNAc...) asparagineSequence analysis1
Lipidationi637GPI-anchor amidated serine1 Publication1

Keywords - PTMi

Glycoprotein, GPI-anchor, Lipoprotein

Proteomic databases

PaxDbiQ8GZ17

Expressioni

Tissue specificityi

Expressed in roots, stems, leaves, flowers and siliques.1 Publication

Gene expression databases

ExpressionAtlasiQ8GZ17 baseline and differential
GenevisibleiQ8GZ17 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G16120.1

Structurei

3D structure databases

ProteinModelPortaliQ8GZ17
SMRiQ8GZ17
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the COBRA family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IGX1 Eukaryota
ENOG410ZHV6 LUCA
HOGENOMiHOG000217914
InParanoidiQ8GZ17
OMAiKQPYAFR
OrthoDBiEOG093604NZ
PhylomeDBiQ8GZ17

Family and domain databases

InterProiView protein in InterPro
IPR006918 COBRA_pln
PfamiView protein in Pfam
PF04833 COBRA, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD140986 GPI-anchored_pln, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8GZ17-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF
60 70 80 90 100
VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
110 120 130 140 150
ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR
160 170 180 190 200
VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
210 220 230 240 250
YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN
260 270 280 290 300
WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
310 320 330 340 350
RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK
360 370 380 390 400
MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
410 420 430 440 450
AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR
460 470 480 490 500
ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
510 520 530 540 550
SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF
560 570 580 590 600
NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
610 620 630 640 650
TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA
660
LPVLALLILR A
Length:661
Mass (Da):72,602
Last modified:August 22, 2003 - v2
Checksum:i3128DFFB661A90AA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y14423 mRNA Translation: CAA74765.1
Z97340 Genomic DNA Translation: CAB10391.1
AL161543 Genomic DNA Translation: CAB78654.1
CP002687 Genomic DNA Translation: AEE83695.1
AK117261 mRNA Translation: BAC41936.1
BT005903 mRNA Translation: AAO64838.1
PIRiE71427
RefSeqiNP_567484.1, NM_117705.6
UniGeneiAt.182

Genome annotation databases

EnsemblPlantsiAT4G16120.1; AT4G16120.1; AT4G16120
GeneIDi827298
GrameneiAT4G16120.1; AT4G16120.1; AT4G16120
KEGGiath:AT4G16120

Similar proteinsi

Entry informationi

Entry nameiCOBL7_ARATH
AccessioniPrimary (citable) accession number: Q8GZ17
Secondary accession number(s): O24605
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 22, 2003
Last sequence update: August 22, 2003
Last modified: April 25, 2018
This is version 107 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health