Unreviewed, UniProtKB/TrEMBL Q8GYW5 (Q8GYW5_ARATH)

Names and origin

Protein names

Submitted name:
    At4g08160 EMBL AAO64897.1
Submitted name:
    Putative xylan endohydrolase EMBL BAC42019.1

Gene names

Name:

At4g08160/F9M13_1 EMBL BAC42019.1

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	752 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432V0

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU003432V0 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8GYW5-1 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: AE1411F597826F36	FASTA	752	84,565
	10 20 30 40 50 60 MEKNTNTNHT SDDNNDKNHT NEEQEKIILN PNFEDGLNNW TGRACKIVLH ESMNSGKIVP 70 80 90 100 110 120 LSGKVFAAAT QRKDTWNGIQ QEISGRFRRK RVYEVTAVVR IFGNNVTSAT VQATLWVLNA 130 140 150 160 170 180 NKREQYIVIA NVQATDKNWV ELKGKFVIHG SPSRVILYLE GPPPRADILL NSLVVQHAKR 190 200 210 220 230 240 NRPSPPPFYE NPGFGVNIVE NSEVLDGGTK PWFTLGNCKL SVGQGAPRTL PPMARDTLGP 250 260 270 280 290 300 HKPLGGNYIV VTNRTQTWMG PAQMITDKIK LFLTYQISAW VKLGVGVSGS SMSPQNVNIA 310 320 330 340 350 360 LSVDNQWVNG GQVEVTVGDT WHEIAGSFRL EKQPQNVMVY VQGPGAGIDL MIAALQIFPV 370 380 390 400 410 420 DRRERVRCLK RQVDEVRKRD IVLKFSGLND DESFDLFPYI VKVKQTYNSF PVGTCVNRTD 430 440 450 460 470 480 IDNEDFVDFF TKNFNWAVFG NELKWYATEA ERGKVNYQDA DDMLDLCIGN NINVRGHCIF 490 500 510 520 530 540 WEVESTVQPW VRQLNKTDLM NAVQKRLTDL LTRYKGKFKH YDVNNEMLHG SFYQDRLGKG 550 560 570 580 590 600 VRALMFNIAH KLDPSPLLFV NDYHVEDGDD PRSSPEKYIK LVLDLEAQGA TVGGIGIQGH 610 620 630 640 650 660 IDSPVGAIVC SALDMLSVLG RPIWFTELDV SSSNEYVRGE DLEVMLWEAF AHPSVEGIML 670 680 690 700 710 720 WGFWELSMSR ENANLVEGEG EVNEAGKRFL EVKQEWLSHA YGIINDESEF TFRGYHGTYA 730 740 750 VEICTPVGIV LKTFVVEKGD TPLVISIDLS SL

References

[1]

"Arabidopsis thaliana full-length cDNA." Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K. Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

[2]

"Arabidopsis ORF clones." Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M., Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M. , Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BT005962 mRNA. Translation: AAO64897.1. AK117349 mRNA. Translation: BAC42019.1.
IPI	IPI00517949.
3D structure databases
HSSP	HSSP built from PDB template 1I1W based on UniProtKB P23360.
ModBase	Search...
Protein family/group databases
CAZy	CBM22. Carbohydrate-Binding Module Family 22. GH10. Glycoside Hydrolase Family 10.
Genome annotation databases
GenomeReviews	Gene locus AT4G08160 in contig CT486007_GR.
Family and domain databases
InterPro	IPR003305. CenC_carb_bd. IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_sg_catalytic. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF02018. CBM_4_9. 2 hits. PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
PROSITE	PS00591. GLYCOSYL_HYDROL_F10. 1 hit. Uncertain. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8GYW5_ARATH

Accession

Primary (citable) accession number: Q8GYW5

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	March 1, 2003
Last modified:	June 16, 2009
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)