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Protein

Cyclin-T1-4

Gene

CYCT1-4

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • cell cycle Source: UniProtKB-KW
  • cell division Source: UniProtKB-KW
  • leaf development Source: TAIR
  • positive regulation of cyclin-dependent protein serine/threonine kinase activity Source: GO_Central
  • positive regulation of phosphorylation of RNA polymerase II C-terminal domain Source: GO_Central
  • positive regulation of transcription from RNA polymerase II promoter Source: GO_Central
  • response to virus Source: TAIR
  • trichome morphogenesis Source: TAIR

Keywordsi

Molecular functionCyclin
Biological processCell cycle, Cell division

Enzyme and pathway databases

ReactomeiR-ATH-674695. RNA Polymerase II Pre-transcription Events.
R-ATH-6796648. TP53 Regulates Transcription of DNA Repair Genes.

Names & Taxonomyi

Protein namesi
Recommended name:
Cyclin-T1-4
Short name:
CycT1;4
Alternative name(s):
Protein AtCycT-like2
Gene namesi
Name:CYCT1-4
Ordered Locus Names:At4g19600
ORF Names:F24J7.161
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G19600.
TAIRilocus:2122975. AT4G19600.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002870561 – 541Cyclin-T1-4Add BLAST541

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei396PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ8GYM6.

PTM databases

iPTMnetiQ8GYM6.

Expressioni

Gene expression databases

ExpressionAtlasiQ8GYM6. baseline and differential.
GenevisibleiQ8GYM6. AT.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

BioGridi12995. 3 interactors.
STRINGi3702.AT4G19600.1.

Structurei

3D structure databases

ProteinModelPortaliQ8GYM6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the cyclin family. Cyclin T subfamily.Curated

Phylogenomic databases

eggNOGiKOG0834. Eukaryota.
COG5333. LUCA.
HOGENOMiHOG000220828.
InParanoidiQ8GYM6.
KOiK15188.
OMAiTETHQAD.
OrthoDBiEOG09360D8T.
PhylomeDBiQ8GYM6.

Family and domain databases

Gene3Di1.10.472.10. 2 hits.
InterProiView protein in InterPro
IPR013763. Cyclin-like.
IPR015429. Cyclin_L/T.
IPR006671. Cyclin_N.
PfamiView protein in Pfam
PF00134. Cyclin_N. 1 hit.
PIRSFiPIRSF036580. Cyclin_L. 2 hits.
SMARTiView protein in SMART
SM00385. CYCLIN. 2 hits.
SUPFAMiSSF47954. SSF47954. 2 hits.

Sequencei

Sequence statusi: Complete.

Q8GYM6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGVLAGDCS FGESGVSSYS RNSNEKQDEV ARWYFGRKEI EENSPSRLDS
60 70 80 90 100
IDLKKETYLR KSYCTFLQDL GMRLKVPQVT IATAIIFCHR FFIRQSHARN
110 120 130 140 150
DRRTIATVCM FLAGKVEETP RPLKDVIVVS YEIIHKKDPT TAQKIKQKEV
160 170 180 190 200
YEQQKELILN GEKIVLSTLG FDFNVYHPYK PLVEAIKKFK VAQNALAQVA
210 220 230 240 250
WNFVNDGLRT SLCLQFKPHH IAAGAIFLAA KFLKVKLPSD GEKVWWQEFD
260 270 280 290 300
VTPRQLEDVS NQMLELYEQN RVPASQVSEV ESSVGGGSAH HVGSRPSARL
310 320 330 340 350
THEHSNSDNL GGSTKATQNR SNDNGSGEAG SVITEQKGER DTETKDSMHT
360 370 380 390 400
ESHPAHKSRS GVEAPGEDKI EKAGAHFPED DKSRIVGTAD VTVSQSPKDI
410 420 430 440 450
KMFRDKVKAK LEAKKVQGEK TRKKDLVDED DLIERELEDV ELAVEDDKDI
460 470 480 490 500
QNKSSMGTEH GEILDGNNLV VNTEEGEMID DVSSTMPSRK RKMESPCEKQ
510 520 530 540
LGEGKRRHDN SENVEEGQKT NPGGSSHSYG DREPRRHSQE R
Length:541
Mass (Da):60,710
Last modified:March 1, 2003 - v1
Checksum:i52766E85673FEE2B
GO

Sequence cautioni

The sequence CAB40377 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence CAB78962 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL021768 Genomic DNA. Translation: CAB40377.1. Sequence problems.
AL161551 Genomic DNA. Translation: CAB78962.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE84203.1.
AK117509 mRNA. Translation: BAC42172.1.
BT029301 mRNA. Translation: ABK32115.1.
PIRiT06153.
RefSeqiNP_193695.2. NM_118080.3.
UniGeneiAt.32800.

Genome annotation databases

EnsemblPlantsiAT4G19600.1; AT4G19600.1; AT4G19600.
GeneIDi827702.
GrameneiAT4G19600.1; AT4G19600.1; AT4G19600.
KEGGiath:AT4G19600.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiCCT14_ARATH
AccessioniPrimary (citable) accession number: Q8GYM6
Secondary accession number(s): Q9SN70
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: March 1, 2003
Last modified: July 5, 2017
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families