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Q8GXT2

- BGL29_ARATH

UniProt

Q8GXT2 - BGL29_ARATH

Protein

Beta-glucosidase 29

Gene

BGLU29

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 77 (01 Oct 2014)
      Sequence version 2 (24 Nov 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei48 – 481SubstrateBy similarity
    Binding sitei151 – 1511SubstrateBy similarity
    Binding sitei196 – 1961SubstrateBy similarity
    Active sitei197 – 1971Proton donorBy similarity
    Binding sitei341 – 3411SubstrateBy similarity
    Active sitei413 – 4131NucleophileBy similarity
    Binding sitei463 – 4631SubstrateBy similarity

    GO - Molecular functioni

    1. beta-glucosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Enzyme and pathway databases

    BioCyciARA:AT2G44470-MONOMER.
    ARA:GQT-898-MONOMER.
    ARA:GQT-899-MONOMER.

    Protein family/group databases

    CAZyiGH1. Glycoside Hydrolase Family 1.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-glucosidase 29 (EC:3.2.1.21)
    Short name:
    AtBGLU29
    Gene namesi
    Name:BGLU29
    Ordered Locus Names:At2g44470
    ORF Names:F4I1.28
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 2

    Organism-specific databases

    TAIRiAT2G44470.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2121Sequence AnalysisAdd
    BLAST
    Chaini22 – 590569Beta-glucosidase 29PRO_0000389591Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Disulfide bondi216 ↔ 224By similarity
    Glycosylationi255 – 2551N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi331 – 3311N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi371 – 3711N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi522 – 5221N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi553 – 5531N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Proteomic databases

    PaxDbiQ8GXT2.
    PRIDEiQ8GXT2.

    Expressioni

    Gene expression databases

    GenevestigatoriQ8GXT2.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8GXT2.
    SMRiQ8GXT2. Positions 29-501.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni470 – 4712Substrate bindingBy similarity

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG2723.
    HOGENOMiHOG000088630.
    InParanoidiQ8GXT2.
    KOiK01188.
    OMAiFQENDIN.
    PhylomeDBiQ8GXT2.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequences (3)i

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    This entry describes 3 isoformsi produced by alternative splicing. Align

    Isoform 1 (identifier: Q8GXT2-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MNVQIFILLL IISWLTPKIT SLPPESQVLD RSSFPDDFVF GTAISAFQSE    50
    GATSEGGKSP TIWDYFSHTF PERTNMQNAD VAVDFYHRYK DDIKLIEELN 100
    VDAFRFSISW ARLIPSGKVK DGVNKEGVQF YKALIDELIA NGIQPSVTLY 150
    HWDHPQALED EYGGFLNPQI IEDFRNFARV CFENFGDKVK MWTTINEPYV 200
    ISVAGYDTGI KAVGRCSKWV NSRCQAGDSA IEPYIVSHHL LLSHAAAVQE 250
    FRNCNKTLQD GKIGIVISPW WLEPYDSTSS ADKEAVERGL PLELEWHLNP 300
    VIYGDYPETM KKHVGNRLPA FTPEQSKMLI NSSDFIGVNY YSIHFTAHLP 350
    HIDHTRPRFR TDHHFEKKLI NRSNHETGPG DDRGKIHSHP EGLRRVLNYI 400
    KDKYNNPIVY VKENGIDHYD DGTKSRETIL KDTFRISYHQ DHLKQVHKAI 450
    IEDGCDVRGY YVWSLFDNFE WEHGYNSRFG MYYVDFKNNL QRYPKDSVNW 500
    FKKFLSRPVV RSEETEDEKV CNVSRKEEKI NKALDVSEGF KTSVDSIVNL 550
    IKNGSRIEEE DDEEERDFCA FKNHNDQLGF FLKLQNSLGF 590

    Note: Derived from EST data. No experimental confirmation available.

    Length:590
    Mass (Da):68,244
    Last modified:November 24, 2009 - v2
    Checksum:iD0854736ED5FC6E2
    GO
    Isoform 2 (identifier: Q8GXT2-2) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         451-451: I → M
         452-590: Missing.

    Show »
    Length:451
    Mass (Da):51,740
    Checksum:iBE062A7CDE368D92
    GO
    Isoform 3 (identifier: Q8GXT2-3) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         381-397: DDRGKIHSHPEGLRRVL → VCNILIIFIPKILKCFD
         398-590: Missing.

    Note: Derived from EST data. No experimental confirmation available.

    Show »
    Length:397
    Mass (Da):45,271
    Checksum:iFAD36442B9C6E55C
    GO

    Sequence cautioni

    The sequence AAC16093.1 differs from that shown. Reason: Erroneous gene model prediction.

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei381 – 39717DDRGK…LRRVL → VCNILIIFIPKILKCFD in isoform 3. CuratedVSP_038460Add
    BLAST
    Alternative sequencei398 – 590193Missing in isoform 3. CuratedVSP_038461Add
    BLAST
    Alternative sequencei451 – 4511I → M in isoform 2. 1 PublicationVSP_038462
    Alternative sequencei452 – 590139Missing in isoform 2. 1 PublicationVSP_038463Add
    BLAST

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC004521 Genomic DNA. Translation: AAC16093.1. Sequence problems.
    CP002685 Genomic DNA. Translation: AEC10423.1.
    CP002685 Genomic DNA. Translation: AEC10424.1.
    CP002685 Genomic DNA. Translation: AEC10425.1.
    AK118055 mRNA. Translation: BAC42686.1.
    PIRiT02402.
    RefSeqiNP_001078056.1. NM_001084587.1. [Q8GXT2-3]
    NP_001118524.1. NM_001125052.1. [Q8GXT2-1]
    NP_850417.1. NM_180086.1. [Q8GXT2-2]
    UniGeneiAt.36755.

    Genome annotation databases

    EnsemblPlantsiAT2G44470.3; AT2G44470.3; AT2G44470. [Q8GXT2-1]
    GeneIDi819054.
    KEGGiath:AT2G44470.

    Keywords - Coding sequence diversityi

    Alternative splicing

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC004521 Genomic DNA. Translation: AAC16093.1 . Sequence problems.
    CP002685 Genomic DNA. Translation: AEC10423.1 .
    CP002685 Genomic DNA. Translation: AEC10424.1 .
    CP002685 Genomic DNA. Translation: AEC10425.1 .
    AK118055 mRNA. Translation: BAC42686.1 .
    PIRi T02402.
    RefSeqi NP_001078056.1. NM_001084587.1. [Q8GXT2-3 ]
    NP_001118524.1. NM_001125052.1. [Q8GXT2-1 ]
    NP_850417.1. NM_180086.1. [Q8GXT2-2 ]
    UniGenei At.36755.

    3D structure databases

    ProteinModelPortali Q8GXT2.
    SMRi Q8GXT2. Positions 29-501.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH1. Glycoside Hydrolase Family 1.

    Proteomic databases

    PaxDbi Q8GXT2.
    PRIDEi Q8GXT2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT2G44470.3 ; AT2G44470.3 ; AT2G44470 . [Q8GXT2-1 ]
    GeneIDi 819054.
    KEGGi ath:AT2G44470.

    Organism-specific databases

    TAIRi AT2G44470.

    Phylogenomic databases

    eggNOGi COG2723.
    HOGENOMi HOG000088630.
    InParanoidi Q8GXT2.
    KOi K01188.
    OMAi FQENDIN.
    PhylomeDBi Q8GXT2.

    Enzyme and pathway databases

    BioCyci ARA:AT2G44470-MONOMER.
    ARA:GQT-898-MONOMER.
    ARA:GQT-899-MONOMER.

    Gene expression databases

    Genevestigatori Q8GXT2.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
      Strain: cv. Columbia.
    4. Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiBGL29_ARATH
    AccessioniPrimary (citable) accession number: Q8GXT2
    Secondary accession number(s): A8MQN1, O64881
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 24, 2009
    Last sequence update: November 24, 2009
    Last modified: October 1, 2014
    This is version 77 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3