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Protein

Probable polyol transporter 6

Gene

PLT6

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Plasma membrane sugar-proton symporter.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Sugar transport, Symport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Probable polyol transporter 6
Gene namesi
Name:PLT6
Ordered Locus Names:At4g36670
ORF Names:AP22.86, C7A10.690
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G36670.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei25 – 4521Helical; Name=1Sequence analysisAdd
BLAST
Transmembranei54 – 7421Helical; Name=2Sequence analysisAdd
BLAST
Transmembranei85 – 10521Helical; Name=3Sequence analysisAdd
BLAST
Transmembranei116 – 13621Helical; Name=4Sequence analysisAdd
BLAST
Transmembranei142 – 16221Helical; Name=5Sequence analysisAdd
BLAST
Transmembranei177 – 19721Helical; Name=6Sequence analysisAdd
BLAST
Transmembranei275 – 29521Helical; Name=7Sequence analysisAdd
BLAST
Transmembranei313 – 33321Helical; Name=8Sequence analysisAdd
BLAST
Transmembranei343 – 36321Helical; Name=9Sequence analysisAdd
BLAST
Transmembranei372 – 39221Helical; Name=10Sequence analysisAdd
BLAST
Transmembranei414 – 43421Helical; Name=11Sequence analysisAdd
BLAST
Transmembranei444 – 46421Helical; Name=12Sequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 493493Probable polyol transporter 6PRO_0000259874Add
BLAST

Proteomic databases

PaxDbiQ8GXR2.
PRIDEiQ8GXR2.

Expressioni

Gene expression databases

ExpressionAtlasiQ8GXR2. baseline and differential.
GenevisibleiQ8GXR2. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G36670.1.

Structurei

3D structure databases

ProteinModelPortaliQ8GXR2.
SMRiQ8GXR2. Positions 34-469.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0254. Eukaryota.
ENOG410XNQK. LUCA.
HOGENOMiHOG000202868.
InParanoidiQ8GXR2.
OMAiFALQCAI.
PhylomeDBiQ8GXR2.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
IPR003663. Sugar/inositol_transpt.
IPR005829. Sugar_transporter_CS.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
PRINTSiPR00171. SUGRTRNSPORT.
SUPFAMiSSF103473. SSF103473. 2 hits.
TIGRFAMsiTIGR00879. SP. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
PS00216. SUGAR_TRANSPORT_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8GXR2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADQISGEKP AGVNRFALQC AIVASIVSII FGYDTGVMSG AMVFIEEDLK
60 70 80 90 100
TNDVQIEVLT GILNLCALVG SLLAGRTSDI IGRRYTIVLA SILFMLGSIL
110 120 130 140 150
MGWGPNYPVL LSGRCTAGLG VGFALMVAPV YSAEIATASH RGLLASLPHL
160 170 180 190 200
CISIGILLGY IVNYFFSKLP MHIGWRLMLG IAAVPSLVLA FGILKMPESP
210 220 230 240 250
RWLIMQGRLK EGKEILELVS NSPEEAELRF QDIKAAAGID PKCVDDVVKM
260 270 280 290 300
EGKKTHGEGV WKELILRPTP AVRRVLLTAL GIHFFQHASG IEAVLLYGPR
310 320 330 340 350
IFKKAGITTK DKLFLVTIGV GIMKTTFIFT ATLLLDKVGR RKLLLTSVGG
360 370 380 390 400
MVIALTMLGF GLTMAQNAGG KLAWALVLSI VAAYSFVAFF SIGLGPITWV
410 420 430 440 450
YSSEVFPLKL RAQGASLGVA VNRVMNATVS MSFLSLTSAI TTGGAFFMFA
460 470 480 490
GVAAVAWNFF FFLLPETKGK SLEEIEALFQ RDGDKVRGEN GAA
Length:493
Mass (Da):52,923
Last modified:November 28, 2006 - v2
Checksum:iE49D9E7298E9982A
GO

Sequence cautioni

The sequence BAC42720.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z99708 Genomic DNA. Translation: CAB16808.1.
AL161589 Genomic DNA. Translation: CAB80333.1.
CP002687 Genomic DNA. Translation: AEE86685.1.
AK118092 mRNA. Translation: BAC42720.1. Different initiation.
PIRiA85433.
RefSeqiNP_195385.1. NM_119831.2.
UniGeneiAt.31306.

Genome annotation databases

EnsemblPlantsiAT4G36670.1; AT4G36670.1; AT4G36670.
GeneIDi829820.
GrameneiAT4G36670.1; AT4G36670.1; AT4G36670.
KEGGiath:AT4G36670.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z99708 Genomic DNA. Translation: CAB16808.1.
AL161589 Genomic DNA. Translation: CAB80333.1.
CP002687 Genomic DNA. Translation: AEE86685.1.
AK118092 mRNA. Translation: BAC42720.1. Different initiation.
PIRiA85433.
RefSeqiNP_195385.1. NM_119831.2.
UniGeneiAt.31306.

3D structure databases

ProteinModelPortaliQ8GXR2.
SMRiQ8GXR2. Positions 34-469.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G36670.1.

Proteomic databases

PaxDbiQ8GXR2.
PRIDEiQ8GXR2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G36670.1; AT4G36670.1; AT4G36670.
GeneIDi829820.
GrameneiAT4G36670.1; AT4G36670.1; AT4G36670.
KEGGiath:AT4G36670.

Organism-specific databases

TAIRiAT4G36670.

Phylogenomic databases

eggNOGiKOG0254. Eukaryota.
ENOG410XNQK. LUCA.
HOGENOMiHOG000202868.
InParanoidiQ8GXR2.
OMAiFALQCAI.
PhylomeDBiQ8GXR2.

Miscellaneous databases

PROiQ8GXR2.

Gene expression databases

ExpressionAtlasiQ8GXR2. baseline and differential.
GenevisibleiQ8GXR2. AT.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
IPR003663. Sugar/inositol_transpt.
IPR005829. Sugar_transporter_CS.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
PRINTSiPR00171. SUGRTRNSPORT.
SUPFAMiSSF103473. SSF103473. 2 hits.
TIGRFAMsiTIGR00879. SP. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
PS00216. SUGAR_TRANSPORT_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana."
    Bevan M., Bancroft I., Bent E., Love K., Goodman H.M., Dean C., Bergkamp R., Dirkse W., van Staveren M., Stiekema W., Drost L., Ridley P., Hudson S.-A., Patel K., Murphy G., Piffanelli P., Wedler H., Wedler E.
    , Wambutt R., Weitzenegger T., Pohl T., Terryn N., Gielen J., Villarroel R., De Clercq R., van Montagu M., Lecharny A., Aubourg S., Gy I., Kreis M., Lao N., Kavanagh T., Hempel S., Kotter P., Entian K.-D., Rieger M., Schaefer M., Funk B., Mueller-Auer S., Silvey M., James R., Monfort A., Pons A., Puigdomenech P., Douka A., Voukelatou E., Milioni D., Hatzopoulos P., Piravandi E., Obermaier B., Hilbert H., Duesterhoeft A., Moores T., Jones J.D.G., Eneva T., Palme K., Benes V., Rechmann S., Ansorge W., Cooke R., Berger C., Delseny M., Voet M., Volckaert G., Mewes H.-W., Klosterman S., Schueller C., Chalwatzis N.
    Nature 391:485-488(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  3. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 408-493.
    Strain: cv. Columbia.
  5. "The monosaccharide transporter gene family in land plants is ancient and shows differential subfamily expression and expansion across lineages."
    Johnson D.A., Hill J.P., Thomas M.A.
    BMC Evol. Biol. 6:64-64(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY.

Entry informationi

Entry nameiPLT6_ARATH
AccessioniPrimary (citable) accession number: Q8GXR2
Secondary accession number(s): O23213
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: November 28, 2006
Last modified: July 6, 2016
This is version 81 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.