Q8GX54 (Q8GX54_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
At5g63230 EMBL AAO42939.1

Submitted name:
Carbohydrate-binding X8 domain-containing protein EMBL AED97720.1
Submitted name:
Putative uncharacterized protein At5g63230/MDC12_20 EMBL BAC43038.1

Gene names

Name:	At5g63230/MDC12_20 EMBL BAC43038.1
Ordered Locus Names:	At5g63225 TAIR At5g63225
ORF Names:	AT5G63225 EMBL AED97720.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL BAC43038.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	110 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	Q8GX54 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: 2B1D211C1B333D0E	FASTA	110	12,088
	10 20 30 40 50 60 MSSQLLTLFL LLSAVAIPVV TSRQWCMAMP NATGEQLQAN IDYACSQNVD CTPIQPGGTC 70 80 90 100 110 YEPNTLLDHA SFAMNAYYQS HGRIEDACRF GRTGCFVFID PSNGSCIYYT

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana." Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F. Nature 408:823-826(2000) [PubMed: 11130714] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	"Arabidopsis thaliana full-length cDNA." Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K. Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Arabidopsis ORF clones." Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M., Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M. , Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BT004693 mRNA. Translation: AAO42939.1. CP002688 Genomic DNA. Translation: AED97720.1. AK118429 mRNA. Translation: BAC43038.1.
IPI	IPI00852266.
RefSeq	NP_001078788.1. NM_001085319.1.
UniGene	At.29010.
3D structure databases
ProteinModelPortal	Q8GX54.
SMR	Q8GX54. Positions 19-110.
ModBase	Search...
Protein family/group databases
CAZy	CBM43. Carbohydrate-Binding Module Family 43.
Proteomic databases
PRIDE	Q8GX54.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G63225.1; AT5G63225.1; AT5G63225.
GeneID	5008330.
GenomeReviews	Gene locus AT5G63225 in contig BA000015_GR.
KEGG	ath:AT5G63225.
Organism-specific databases
TAIR	At5g63225.
Phylogenomic databases
GeneTree	EPGT00050000009358.
HOGENOM	HBG603981.
PhylomeDB	Q8GX54.
ProtClustDB	CLSN2699131.
Gene expression databases
Genevestigator	Q8GX54.
Family and domain databases
InterPro	IPR012946. X8. [Graphical view]
Pfam	PF07983. X8. 1 hit. [Graphical view]
SMART	SM00768. X8. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8GX54_ARATH

Accession

Primary (citable) accession number: Q8GX54

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	March 1, 2003
Last modified:	January 25, 2012
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)