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Protein

Ethylene-responsive transcription factor ERF116

Gene

ERF116

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi80 – 140AP2/ERFPROSITE-ProRule annotationAdd BLAST61

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • DNA binding transcription factor activity Source: TAIR

GO - Biological processi

  • ethylene-activated signaling pathway Source: UniProtKB-KW
  • pollen development Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionActivator, DNA-binding
Biological processEthylene signaling pathway, Transcription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Ethylene-responsive transcription factor ERF116
Gene namesi
Name:ERF116
Ordered Locus Names:At1g25470
ORF Names:F2J7.8
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G25470
TAIRilocus:2031245 AT1G25470

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002904271 – 287Ethylene-responsive transcription factor ERF116Add BLAST287

Proteomic databases

PaxDbiQ8GW17

Expressioni

Gene expression databases

ExpressionAtlasiQ8GW17 baseline and differential
GenevisibleiQ8GW17 AT

Interactioni

Protein-protein interaction databases

BioGridi24370, 2 interactors
IntActiQ8GW17, 2 interactors
STRINGi3702.AT1G25470.1

Structurei

3D structure databases

ProteinModelPortaliQ8GW17
SMRiQ8GW17
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG410JKI1 Eukaryota
ENOG41115X1 LUCA
HOGENOMiHOG000090785
InParanoidiQ8GW17
OMAiRFVHEIT
OrthoDBiEOG09360NDL
PhylomeDBiQ8GW17

Family and domain databases

CDDicd00018 AP2, 1 hit
Gene3Di3.30.730.10, 1 hit
InterProiView protein in InterPro
IPR017392 AP2/ERF-transcript_factor
IPR001471 AP2/ERF_dom
IPR036955 AP2/ERF_dom_sf
IPR016177 DNA-bd_dom_sf
PfamiView protein in Pfam
PF00847 AP2, 1 hit
PIRSFiPIRSF038123 PTI6, 1 hit
SMARTiView protein in SMART
SM00380 AP2, 1 hit
SUPFAMiSSF54171 SSF54171, 1 hit
PROSITEiView protein in PROSITE
PS51032 AP2_ERF, 1 hit

Sequencei

Sequence statusi: Complete.

Q8GW17-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSFVKPERD SLLRTVRIVF TDPDATDDSS SSSDEWLPKP RKVKRFVHEI
60 70 80 90 100
TFLPQVSESS QDRSNAVKTP RRKSTRQFKY PVGVRPRPSG KFAAEILNPF
110 120 130 140 150
TKTKKWLGTY ETPAEAEKAY VDKKVEYDAL ASSGSAVSSS VVTVTSQCLR
160 170 180 190 200
SPTSASVSCV SADDLSKEKT SLNKDVAASG DSTTKEVFTT FDFSDVKIPD
210 220 230 240 250
LRFLAAEEDS MVSNANGAEL DFDCFLTDSN ILLDDYSLLE NDINFSRFEN
260 270 280
SLPSELPDCD FTEMEFQLDD FKFAYTDHLT TPPLGLV
Length:287
Mass (Da):31,992
Last modified:March 1, 2003 - v1
Checksum:i91843CCBAC492F18
GO

Sequence cautioni

The sequence AAG50818 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC079281 Genomic DNA Translation: AAG50818.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE30628.1
CP002684 Genomic DNA Translation: AEE30629.1
AK119144 mRNA Translation: BAC43714.1
BT005281 mRNA Translation: AAO63345.1
PIRiH86384
RefSeqiNP_173918.2, NM_102358.4
NP_973912.1, NM_202183.2
UniGeneiAt.41335
At.68159

Genome annotation databases

EnsemblPlantsiAT1G25470.1; AT1G25470.1; AT1G25470
AT1G25470.2; AT1G25470.2; AT1G25470
GeneIDi839133
GrameneiAT1G25470.1; AT1G25470.1; AT1G25470
AT1G25470.2; AT1G25470.2; AT1G25470
KEGGiath:AT1G25470

Similar proteinsi

Entry informationi

Entry nameiEF116_ARATH
AccessioniPrimary (citable) accession number: Q8GW17
Secondary accession number(s): Q9C6L7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 12, 2007
Last sequence update: March 1, 2003
Last modified: May 23, 2018
This is version 103 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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