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Protein
Submitted name:

60S ribosomal protein L38, putative, expressed

Gene

OJ1612_A04.113

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-OSA-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-OSA-1799339 SRP-dependent cotranslational protein targeting to membrane
R-OSA-72689 Formation of a pool of free 40S subunits
R-OSA-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-OSA-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-OSA-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L38, putative, expressedImported
Submitted name:
Os07g0546700 proteinImported
Submitted name:
Os11g0433900 proteinImported
Submitted name:
Putative 60S ribosomal protein L38Imported
Submitted name:
Ribosomal L38e protein familyImported
Submitted name:
cDNA clone:001-031-H04, full insert sequenceImported
Gene namesi
Name:OJ1612_A04.113Imported
Synonyms:Os07g0546700Imported
Ordered Locus Names:LOC_Os11g24610Imported, Os11g0433900Imported
ORF Names:OsJ_33784Imported, OSNPB_070546700Imported, OSNPB_110433900Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componentsi: Chromosome 11, Chromosome 7

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

ExpressionAtlasiQ8GVY2 differential

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os07g36254.1

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL38 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3499 Eukaryota
ENOG4112229 LUCA
KOiK02923
OMAiRDIKQFI
OrthoDBiEOG09360YVG

Family and domain databases

Gene3Di3.30.720.90, 1 hit
InterProiView protein in InterPro
IPR002675 Ribosomal_L38e
IPR038464 Ribosomal_L38e_sf
PANTHERiPTHR10965 PTHR10965, 1 hit
PfamiView protein in Pfam
PF01781 Ribosomal_L38e, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD010361 Ribosomal_L38e, 1 hit

Sequencei

Sequence statusi: Complete.

Q8GVY2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKQIHEIKD FLLTARRKDA RSVRIKRTKD AVKFKVRCSK YLYTLCVFDA
60
DKANKLKQSL PPGLTVQEV
Length:69
Mass (Da):8,036
Last modified:October 1, 2003 - v2
Checksum:i96426F4352DC3DEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC133931 Genomic DNA Translation: AAX96401.1
DP000010 Genomic DNA Translation: ABA93131.1
AP003960 Genomic DNA Translation: BAC79676.1
AP008217 Genomic DNA Translation: BAF28164.1
AK059679 mRNA Translation: BAG87074.1
AP014963 Genomic DNA Translation: BAT02015.1
AP014967 Genomic DNA Translation: BAT13834.1
CM000148 Genomic DNA Translation: EAZ18243.1
RefSeqiXP_015617721.1, XM_015762235.1
XP_015647594.1, XM_015792108.1
UniGeneiOs.57446
Os.57689
Os.72610

Genome annotation databases

EnsemblPlantsiOs07t0546700-01; Os07t0546700-01; Os07g0546700
Os11t0433900-01; Os11t0433900-01; Os11g0433900
GeneIDi4343529
4350406
GrameneiOs07t0546700-01; Os07t0546700-01; Os07g0546700
Os11t0433900-01; Os11t0433900-01; Os11g0433900
KEGGiosa:4343529
osa:4350406

Similar proteinsi

Entry informationi

Entry nameiQ8GVY2_ORYSJ
AccessioniPrimary (citable) accession number: Q8GVY2
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: October 1, 2003
Last modified: May 23, 2018
This is version 127 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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