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Protein
Submitted name:

60S ribosomal protein L38, putative, expressed

Gene

OJ1612_A04.113

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L38, putative, expressedImported
Submitted name:
Os07g0546700 proteinImported
Submitted name:
Os11g0433900 proteinImported
Submitted name:
Putative 60S ribosomal protein L38Imported
Submitted name:
Ribosomal L38e protein familyImported
Submitted name:
Uncharacterized proteinImported
Submitted name:
cDNA clone:001-031-H04, full insert sequenceImported
Gene namesi
Name:OJ1612_A04.113Imported
Synonyms:Os07g0546700Imported
Ordered Locus Names:LOC_Os11g24610Imported, Os11g0433900Imported
ORF Names:OsJ_33784Imported, OSNPB_070546700Imported, OSNPB_110433900Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componentsi: Chromosome 11, Chromosome 7

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os07g36254.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L38e family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3499. Eukaryota.
ENOG4112229. LUCA.
KOiK02923.
OMAiLYTLVIQ.
OrthoDBiEOG09360YVG.

Family and domain databases

InterProiIPR002675. Ribosomal_L38e.
[Graphical view]
PANTHERiPTHR10965. PTHR10965. 1 hit.
PfamiPF01781. Ribosomal_L38e. 1 hit.
[Graphical view]
ProDomiPD010361. Ribosomal_L38e. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Q8GVY2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKQIHEIKD FLLTARRKDA RSVRIKRTKD AVKFKVRCSK YLYTLCVFDA
60
DKANKLKQSL PPGLTVQEV
Length:69
Mass (Da):8,036
Last modified:October 1, 2003 - v2
Checksum:i96426F4352DC3DEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC133931 Genomic DNA. Translation: AAX96401.1.
DP000010 Genomic DNA. Translation: ABA93131.1.
AP003960 Genomic DNA. Translation: BAC79676.1.
AP008217 Genomic DNA. Translation: BAF28164.1.
AK059679 mRNA. Translation: BAG87074.1.
AP014963 Genomic DNA. Translation: BAT02015.1.
AP014967 Genomic DNA. Translation: BAT13834.1.
CM000148 Genomic DNA. Translation: EAZ18243.1.
RefSeqiXP_015617721.1. XM_015762235.1.
XP_015647594.1. XM_015792108.1.
UniGeneiOs.57446.
Os.57689.
Os.72610.

Genome annotation databases

EnsemblPlantsiOS07T0546700-01; OS07T0546700-01; OS07G0546700.
OS11T0433900-01; OS11T0433900-01; OS11G0433900.
GeneIDi4343529.
4350406.
GrameneiOS07T0546700-01; OS07T0546700-01; OS07G0546700.
OS11T0433900-01; OS11T0433900-01; OS11G0433900.
KEGGiosa:4343529.
osa:4350406.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC133931 Genomic DNA. Translation: AAX96401.1.
DP000010 Genomic DNA. Translation: ABA93131.1.
AP003960 Genomic DNA. Translation: BAC79676.1.
AP008217 Genomic DNA. Translation: BAF28164.1.
AK059679 mRNA. Translation: BAG87074.1.
AP014963 Genomic DNA. Translation: BAT02015.1.
AP014967 Genomic DNA. Translation: BAT13834.1.
CM000148 Genomic DNA. Translation: EAZ18243.1.
RefSeqiXP_015617721.1. XM_015762235.1.
XP_015647594.1. XM_015792108.1.
UniGeneiOs.57446.
Os.57689.
Os.72610.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os07g36254.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS07T0546700-01; OS07T0546700-01; OS07G0546700.
OS11T0433900-01; OS11T0433900-01; OS11G0433900.
GeneIDi4343529.
4350406.
GrameneiOS07T0546700-01; OS07T0546700-01; OS07G0546700.
OS11T0433900-01; OS11T0433900-01; OS11G0433900.
KEGGiosa:4343529.
osa:4350406.

Phylogenomic databases

eggNOGiKOG3499. Eukaryota.
ENOG4112229. LUCA.
KOiK02923.
OMAiLYTLVIQ.
OrthoDBiEOG09360YVG.

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Family and domain databases

InterProiIPR002675. Ribosomal_L38e.
[Graphical view]
PANTHERiPTHR10965. PTHR10965. 1 hit.
PfamiPF01781. Ribosomal_L38e. 1 hit.
[Graphical view]
ProDomiPD010361. Ribosomal_L38e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8GVY2_ORYSJ
AccessioniPrimary (citable) accession number: Q8GVY2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: October 1, 2003
Last modified: November 30, 2016
This is version 114 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.