Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

60S ribosomal protein L38, putative, expressed

Gene

OJ1612_A04.113

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L38, putative, expressedImported
Submitted name:
Os07g0546700 proteinImported
Submitted name:
Os11g0433900 proteinImported
Submitted name:
Putative 60S ribosomal protein L38Imported
Submitted name:
Ribosomal L38e protein familyImported
Submitted name:
cDNA clone:001-031-H04, full insert sequenceImported
Gene namesi
Name:OJ1612_A04.113Imported
Synonyms:Os07g0546700Imported
Ordered Locus Names:LOC_Os11g24610Imported, Os11g0433900Imported
ORF Names:OsJ_33784Imported, OSNPB_070546700Imported, OSNPB_110433900Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componentsi: Chromosome 11, Chromosome 7

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os07g36254.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL38 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3499. Eukaryota.
ENOG4112229. LUCA.
KOiK02923.
OMAiRDIKQFI.
OrthoDBiEOG09360YVG.

Family and domain databases

InterProiView protein in InterPro
IPR002675. Ribosomal_L38e.
PANTHERiPTHR10965. PTHR10965. 1 hit.
PfamiView protein in Pfam
PF01781. Ribosomal_L38e. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD010361. Ribosomal_L38e. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8GVY2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKQIHEIKD FLLTARRKDA RSVRIKRTKD AVKFKVRCSK YLYTLCVFDA
60
DKANKLKQSL PPGLTVQEV
Length:69
Mass (Da):8,036
Last modified:October 1, 2003 - v2
Checksum:i96426F4352DC3DEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC133931 Genomic DNA. Translation: AAX96401.1.
DP000010 Genomic DNA. Translation: ABA93131.1.
AP003960 Genomic DNA. Translation: BAC79676.1.
AP008217 Genomic DNA. Translation: BAF28164.1.
AK059679 mRNA. Translation: BAG87074.1.
AP014963 Genomic DNA. Translation: BAT02015.1.
AP014967 Genomic DNA. Translation: BAT13834.1.
CM000148 Genomic DNA. Translation: EAZ18243.1.
RefSeqiXP_015617721.1. XM_015762235.1.
XP_015647594.1. XM_015792108.1.
UniGeneiOs.57446.
Os.57689.
Os.72610.

Genome annotation databases

EnsemblPlantsiOS07T0546700-01; OS07T0546700-01; OS07G0546700.
OS11T0433900-01; OS11T0433900-01; OS11G0433900.
GeneIDi4343529.
4350406.
GrameneiOS07T0546700-01; OS07T0546700-01; OS07G0546700.
OS11T0433900-01; OS11T0433900-01; OS11G0433900.
KEGGiosa:4343529.
osa:4350406.

Similar proteinsi

Entry informationi

Entry nameiQ8GVY2_ORYSJ
AccessioniPrimary (citable) accession number: Q8GVY2
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: October 1, 2003
Last modified: August 30, 2017
This is version 120 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported