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Q8GVE8

- CAPP4_ARATH

UniProt

Q8GVE8 - CAPP4_ARATH

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Protein

Phosphoenolpyruvate carboxylase 4

Gene

PPC4

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.

Cofactori

Mg2+By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei154 – 1541By similarity
Active sitei699 – 6991By similarity

GO - Molecular functioni

  1. phosphoenolpyruvate carboxylase activity Source: TAIR

GO - Biological processi

  1. carbon fixation Source: UniProtKB-KW
  2. photosynthesis Source: UniProtKB-KW
  3. tricarboxylic acid cycle Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Carbon dioxide fixation, Photosynthesis

Keywords - Ligandi

Magnesium

Enzyme and pathway databases

BioCyciARA:AT1G68750-MONOMER.
BRENDAi4.1.1.31. 399.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylase 4 (EC:4.1.1.31)
Short name:
AtPPC4
Short name:
PEPC 4
Short name:
PEPCase 4
Gene namesi
Name:PPC4
Ordered Locus Names:At1g68750
ORF Names:F14K14.14, F24J5.1
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G68750.

Subcellular locationi

Cytoplasm By similarity

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 10321032Phosphoenolpyruvate carboxylase 4PRO_0000166660Add
BLAST

Proteomic databases

PaxDbiQ8GVE8.
PRIDEiQ8GVE8.

Expressioni

Tissue specificityi

Expressed at low levels in flowers and siliques, and detectable in roots.1 Publication

Gene expression databases

GenevestigatoriQ8GVE8.

Interactioni

Subunit structurei

Homotetramer.By similarity

Structurei

3D structure databases

ProteinModelPortaliQ8GVE8.
SMRiQ8GVE8. Positions 14-322, 442-1032.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.Curated

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
InParanoidiQ8GVE8.
KOiK01595.
OMAiISCQHYR.
PhylomeDBiQ8GVE8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 2 hits.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8GVE8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTDTTDDIAE EISFQSFEDD CKLLGSLFHD VLQREVGNPF MEKVERIRIL
60 70 80 90 100
AQSALNLRMA GIEDTANLLE KQLTSEISKM PLEEALTLAR TFTHSLNLMG
110 120 130 140 150
IADTHHRMHK VHNVTQLARS CDDIFSQLLQ SGISPDELYK TVCKQEVEIV
160 170 180 190 200
LTAHPTQINR RTLQYKHIRI AHLLEYNTRS DLSVEDRETL IEDLVREITS
210 220 230 240 250
LWQTDELRRQ KPTPVDEARA GLNIVEQSLW KAVPQYLRRV SNSLKKFTGK
260 270 280 290 300
PLPLTCTPMK FGSWMGGDRD GNPNVTAKVT KEVSLLSRWM AIDLYIREVD
310 320 330 340 350
SLRFELSTDR CSDRFSRLAD KILEKDYDRG KSNFQKQQSS SCLPTQLPAR
360 370 380 390 400
AHLPACIDFG ESRHTKFEIA TTDYMPPNLQ KQNEQDFSES DWEKIDNGSR
410 420 430 440 450
SGLTSRGSFS STSQLLLQRK LFEESQVGKT SFQKLLEPPP LKRAGSAPYR
460 470 480 490 500
IVLGEVKEKL VKTRRLLELL IEGLPCEYDP KNSYETSDQL LEPLLLCYES
510 520 530 540 550
LQSSGARVLA DGRLADLIRR VSTFGMVLVK LDLRQEAARH SEALDAITTY
560 570 580 590 600
LDMGTYSEWD EEKKLEFLTR ELKGKRPLVP QCIKVGPDVK EVLDTFRVAA
610 620 630 640 650
ELGSESLGAY VISMASNASD VLAVELLQKD ARLALTSEHG KPCPGGTLRV
660 670 680 690 700
VPLFETVNDL RAAGPSIRKL LSIDWYREHI QKNHNGHQEV MVGYSDSGKD
710 720 730 740 750
AGRFTAAWEL YKAQENVVAA CNEFGIKITL FHGRGGSIGR GGGPTYLAIQ
760 770 780 790 800
SQPPGSVMGS LRSTEQGEMV QAKFGIPQTA VRQLEVYTTA VLLATLKPPQ
810 820 830 840 850
PPREEKWRNL MEEISGISCQ HYRSTVYENP EFLSYFHEAT PQAELGFLNI
860 870 880 890 900
GSRPTRRKSS SGIGHLRAIP WVFAWTQTRF VLPAWLGVGA GLKGVSEKGH
910 920 930 940 950
ADDLKEMYKE WPFFQSTLEL IEMVLAKADI PMTKHYDEQL VSEKRRGLGT
960 970 980 990 1000
ELRKELMTTE KYVLVISGHE KLLQDNKSLK KLIDSRLPYL NAMNMLQVEI
1010 1020 1030
LKRLRRDEDN NKLRDALLIT INGIAAGMRN TG
Length:1,032
Mass (Da):116,586
Last modified:March 1, 2003 - v1
Checksum:i750116B15B9ECA3E
GO

Sequence cautioni

The sequence AAD49968.1 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence AAG52040.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ532903 mRNA. Translation: CAD58727.1.
AC008075 Genomic DNA. Translation: AAD49968.1. Sequence problems.
AC011914 Genomic DNA. Translation: AAG52040.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE34835.1.
PIRiC96712.
RefSeqiNP_177043.2. NM_105548.4.
UniGeneiAt.45175.

Genome annotation databases

EnsemblPlantsiAT1G68750.1; AT1G68750.1; AT1G68750.
GeneIDi843206.
KEGGiath:AT1G68750.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ532903 mRNA. Translation: CAD58727.1 .
AC008075 Genomic DNA. Translation: AAD49968.1 . Sequence problems.
AC011914 Genomic DNA. Translation: AAG52040.1 . Sequence problems.
CP002684 Genomic DNA. Translation: AEE34835.1 .
PIRi C96712.
RefSeqi NP_177043.2. NM_105548.4.
UniGenei At.45175.

3D structure databases

ProteinModelPortali Q8GVE8.
SMRi Q8GVE8. Positions 14-322, 442-1032.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi Q8GVE8.
PRIDEi Q8GVE8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G68750.1 ; AT1G68750.1 ; AT1G68750 .
GeneIDi 843206.
KEGGi ath:AT1G68750.

Organism-specific databases

GeneFarmi 5063. 479.
TAIRi AT1G68750.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238648.
InParanoidi Q8GVE8.
KOi K01595.
OMAi ISCQHYR.
PhylomeDBi Q8GVE8.

Enzyme and pathway databases

BioCyci ARA:AT1G68750-MONOMER.
BRENDAi 4.1.1.31. 399.

Gene expression databases

Genevestigatori Q8GVE8.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 2 hits.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 2 hits.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Identification and expression analysis of a gene encoding a bacterial-type phosphoenolpyruvate carboxylase from Arabidopsis and rice."
    Sanchez R., Cejudo F.J.
    Plant Physiol. 132:949-957(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, GENE FAMILY, NOMENCLATURE.
    Strain: cv. Columbia.
  2. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  3. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiCAPP4_ARATH
AccessioniPrimary (citable) accession number: Q8GVE8
Secondary accession number(s): Q9CA39, Q9SX35
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: March 1, 2003
Last modified: November 26, 2014
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3