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Protein

Transcription factor TRY

Gene

TRY

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Transcription factor. Involved in epidermal cell fate specification. Negative regulator of trichome development, including endoreplication, by lateral inhibition involving intercellular interactions. Promotes the formation of hair developing cells (trichoblasts) in H position in root epidermis, probably by inhibiting non-hair cell (atrichoblasts) formation.2 Publications

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • transcription factor activity, sequence-specific DNA binding Source: TAIR

GO - Biological processi

  • multicellular organism development Source: UniProtKB-KW
  • regulation of transcription, DNA-templated Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW
  • trichome branching Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Developmental protein

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription factor TRY
Alternative name(s):
Protein TRIPTYCHON
Gene namesi
Name:TRY
Ordered Locus Names:At5g53200
ORF Names:MFH8.14
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G53200.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002852721 – 106Transcription factor TRYAdd BLAST106

Proteomic databases

PaxDbiQ8GV05.

Expressioni

Tissue specificityi

Expressed in roots, leaves, siliques and inflorescences.1 Publication

Developmental stagei

Ubiquitous in young leaves. Later, restricted to the leaf base in the trichome initiation zone. In mature leaves, confined to trichome cells.1 Publication

Inductioni

Negative autoregulation. Repressed by CPC.1 Publication

Gene expression databases

GenevisibleiQ8GV05. AT.

Interactioni

Subunit structurei

Interacts with GL3 and thus prevents GL1 GL3 interaction. Interacts also with BHLH2.2 Publications

Protein-protein interaction databases

BioGridi20646. 5 interactors.
IntActiQ8GV05. 3 interactors.
STRINGi3702.AT5G53200.1.

Structurei

3D structure databases

ProteinModelPortaliQ8GV05.
SMRiQ8GV05.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 71Myb-likePROSITE-ProRule annotationAdd BLAST38

Sequence similaritiesi

Contains 1 Myb-like domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410J0IN. Eukaryota.
ENOG410YUWZ. LUCA.
HOGENOMiHOG000238078.
InParanoidiQ8GV05.
KOiK09422.
OMAiWIMRNSE.
OrthoDBiEOG09360YCD.
PhylomeDBiQ8GV05.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR017877. Myb-like_dom.
IPR001005. SANT/Myb.
[Graphical view]
PfamiPF00249. Myb_DNA-binding. 1 hit.
[Graphical view]
SMARTiSM00717. SANT. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS50090. MYB_LIKE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8GV05-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDNTDRRRRR KQHKIALHDS EEVSSIEWEF INMTEQEEDL IFRMYRLVGD
60 70 80 90 100
RWDLIAGRVP GRQPEEIERY WIMRNSEGFA DKRRQLHSSS HKHTKPHRPR

FSIYPS
Length:106
Mass (Da):13,006
Last modified:March 1, 2003 - v1
Checksum:i2957DF51D3F86D86
GO

Sequence cautioni

The sequence BAB08423 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY161286 mRNA. Translation: AAN78321.1.
AY519523 mRNA. Translation: AAS09993.1.
AB025622 Genomic DNA. Translation: BAB08423.1. Sequence problems.
CP002688 Genomic DNA. Translation: AED96321.1.
BT024672 mRNA. Translation: ABD57497.1.
RefSeqiNP_200132.2. NM_124699.3.
UniGeneiAt.27502.

Genome annotation databases

EnsemblPlantsiAT5G53200.1; AT5G53200.1; AT5G53200.
GeneIDi835401.
GrameneiAT5G53200.1; AT5G53200.1; AT5G53200.
KEGGiath:AT5G53200.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY161286 mRNA. Translation: AAN78321.1.
AY519523 mRNA. Translation: AAS09993.1.
AB025622 Genomic DNA. Translation: BAB08423.1. Sequence problems.
CP002688 Genomic DNA. Translation: AED96321.1.
BT024672 mRNA. Translation: ABD57497.1.
RefSeqiNP_200132.2. NM_124699.3.
UniGeneiAt.27502.

3D structure databases

ProteinModelPortaliQ8GV05.
SMRiQ8GV05.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi20646. 5 interactors.
IntActiQ8GV05. 3 interactors.
STRINGi3702.AT5G53200.1.

Proteomic databases

PaxDbiQ8GV05.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G53200.1; AT5G53200.1; AT5G53200.
GeneIDi835401.
GrameneiAT5G53200.1; AT5G53200.1; AT5G53200.
KEGGiath:AT5G53200.

Organism-specific databases

TAIRiAT5G53200.

Phylogenomic databases

eggNOGiENOG410J0IN. Eukaryota.
ENOG410YUWZ. LUCA.
HOGENOMiHOG000238078.
InParanoidiQ8GV05.
KOiK09422.
OMAiWIMRNSE.
OrthoDBiEOG09360YCD.
PhylomeDBiQ8GV05.

Miscellaneous databases

PROiQ8GV05.

Gene expression databases

GenevisibleiQ8GV05. AT.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR017877. Myb-like_dom.
IPR001005. SANT/Myb.
[Graphical view]
PfamiPF00249. Myb_DNA-binding. 1 hit.
[Graphical view]
SMARTiSM00717. SANT. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS50090. MYB_LIKE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiTRY_ARATH
AccessioniPrimary (citable) accession number: Q8GV05
Secondary accession number(s): Q9FGL7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 2007
Last sequence update: March 1, 2003
Last modified: November 30, 2016
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Miscellaneous

'Triptychon' means 'triptych' in German. This protein was called 'triptychon' because TRY regulates the branching of trichomes in three branches.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.