Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q8GR34 (Q8GR34_DESVU) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414
Gene names
Name:SOD EMBL BAC20946.1
OrganismDesulfovibrio vulgaris EMBL BAC20946.1
Taxonomic identifier881 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio

Protein attributes

Sequence length238 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3434 Potential EMBL BAC20946.1
Chain35 – 238204 Potential EMBL BAC20946.1
PRO_5000050298

Sequences

Sequence LengthMass (Da)Tools
Q8GR34 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: A3527A4CF6AD5BDD

FASTA23825,535
        10         20         30         40         50         60 
MPSSFTRRCF MSLCASAAVV AAGTRLLGPT VAHAADAPDA FPMPPLPYPE NGLEPAISAR 

        70         80         90        100        110        120 
TISFHYGKHT AAYYGNLNKA VAGTPMATMK LEDVIKSVAG DPAKAGLFNN AAQSWNHTFY 

       130        140        150        160        170        180 
WAGMKPGGGG TPPAKVADAL SAAFGSVDAC VTQLSDAAKT QFASGWAWLA KGRENGKDVL 

       190        200        210        220        230 
KVLKTGNAET PITQGYTPIL TIDVWEHAYY LDYQNKRPDY VQAFFDKLVN WDEVAKRL

« Hide

References

[1]"Cloning and expression of the superoxide dismutase gene from the obligate anaerobic bacterium Desulfovibrio vulgaris (Miyazaki F)."
Nakanishi T., Inoue H., Kitamura M.
J. Biochem. 133:387-393(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Miyazaki EMBL BAC20946.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB093035 Genomic DNA. Translation: BAC20946.1.
RefSeqYP_002436397.1. NC_011769.1.

3D structure databases

HSSPHSSP built from PDB template 1MY6 based on UniProtKB Q8DIR2.
ProteinModelPortalQ8GR34.
SMRQ8GR34. Positions 40-238.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7173905.
KEGGdvm:DvMF_1986.
PATRIC21774209. VBIDesVul86729_2124.

Phylogenomic databases

KOK04564.
ProtClustDBCLSK705766.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
IPR006311. TAT_signal.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SODismutase. 1 hit.
SSF54719. SODismutase. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8GR34_DESVU
AccessionPrimary (citable) accession number: Q8GR34
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: April 3, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info