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Q8GR34

- Q8GR34_DESVU

UniProt

Q8GR34 - Q8GR34_DESVU

Protein

Superoxide dismutase

Gene

SOD

Organism
Desulfovibrio vulgaris
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:SODImported
    OrganismiDesulfovibrio vulgarisImported
    Taxonomic identifieri881 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3434 PotentialImportedAdd
    BLAST
    Chaini35 – 238204 PotentialImportedPRO_5000050298Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliQ8GR34.
    SMRiQ8GR34. Positions 40-238.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    KOiK04564.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    IPR006311. TAT_signal.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    PS51318. TAT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q8GR34-1 [UniParc]FASTAAdd to Basket

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    MPSSFTRRCF MSLCASAAVV AAGTRLLGPT VAHAADAPDA FPMPPLPYPE    50
    NGLEPAISAR TISFHYGKHT AAYYGNLNKA VAGTPMATMK LEDVIKSVAG 100
    DPAKAGLFNN AAQSWNHTFY WAGMKPGGGG TPPAKVADAL SAAFGSVDAC 150
    VTQLSDAAKT QFASGWAWLA KGRENGKDVL KVLKTGNAET PITQGYTPIL 200
    TIDVWEHAYY LDYQNKRPDY VQAFFDKLVN WDEVAKRL 238
    Length:238
    Mass (Da):25,535
    Last modified:March 1, 2003 - v1
    Checksum:iA3527A4CF6AD5BDD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB093035 Genomic DNA. Translation: BAC20946.1.
    RefSeqiYP_002436397.1. NC_011769.1.

    Genome annotation databases

    GeneIDi7173905.
    KEGGidvm:DvMF_1986.
    PATRICi21774209. VBIDesVul86729_2124.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB093035 Genomic DNA. Translation: BAC20946.1 .
    RefSeqi YP_002436397.1. NC_011769.1.

    3D structure databases

    ProteinModelPortali Q8GR34.
    SMRi Q8GR34. Positions 40-238.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7173905.
    KEGGi dvm:DvMF_1986.
    PATRICi 21774209. VBIDesVul86729_2124.

    Phylogenomic databases

    KOi K04564.
    OrthoDBi EOG63NMNT.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    IPR006311. TAT_signal.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    PS51318. TAT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Cloning and expression of the superoxide dismutase gene from the obligate anaerobic bacterium Desulfovibrio vulgaris (Miyazaki F)."
      Nakanishi T., Inoue H., Kitamura M.
      J. Biochem. 133:387-393(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MiyazakiImported.

    Entry informationi

    Entry nameiQ8GR34_DESVU
    AccessioniPrimary (citable) accession number: Q8GR34
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)