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Q8GR34

- Q8GR34_DESVU

UniProt

Q8GR34 - Q8GR34_DESVU

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Protein

Superoxide dismutase

Gene

SOD

Organism
Desulfovibrio vulgaris
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:SODImported
OrganismiDesulfovibrio vulgarisImported
Taxonomic identifieri881 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3434 PotentialImportedAdd
BLAST
Chaini35 – 238204 PotentialImportedPRO_5000050298Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ8GR34.
SMRiQ8GR34. Positions 40-238.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK04564.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
IPR006311. TAT_signal.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8GR34-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPSSFTRRCF MSLCASAAVV AAGTRLLGPT VAHAADAPDA FPMPPLPYPE
60 70 80 90 100
NGLEPAISAR TISFHYGKHT AAYYGNLNKA VAGTPMATMK LEDVIKSVAG
110 120 130 140 150
DPAKAGLFNN AAQSWNHTFY WAGMKPGGGG TPPAKVADAL SAAFGSVDAC
160 170 180 190 200
VTQLSDAAKT QFASGWAWLA KGRENGKDVL KVLKTGNAET PITQGYTPIL
210 220 230
TIDVWEHAYY LDYQNKRPDY VQAFFDKLVN WDEVAKRL
Length:238
Mass (Da):25,535
Last modified:March 1, 2003 - v1
Checksum:iA3527A4CF6AD5BDD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB093035 Genomic DNA. Translation: BAC20946.1.
RefSeqiYP_002436397.1. NC_011769.1.

Genome annotation databases

GeneIDi7173905.
KEGGidvm:DvMF_1986.
PATRICi21774209. VBIDesVul86729_2124.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB093035 Genomic DNA. Translation: BAC20946.1 .
RefSeqi YP_002436397.1. NC_011769.1.

3D structure databases

ProteinModelPortali Q8GR34.
SMRi Q8GR34. Positions 40-238.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 7173905.
KEGGi dvm:DvMF_1986.
PATRICi 21774209. VBIDesVul86729_2124.

Phylogenomic databases

KOi K04564.
OrthoDBi EOG63NMNT.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
IPR006311. TAT_signal.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
PRINTSi PR01703. MNSODISMTASE.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEi PS00088. SOD_MN. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Cloning and expression of the superoxide dismutase gene from the obligate anaerobic bacterium Desulfovibrio vulgaris (Miyazaki F)."
    Nakanishi T., Inoue H., Kitamura M.
    J. Biochem. 133:387-393(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MiyazakiImported.

Entry informationi

Entry nameiQ8GR34_DESVU
AccessioniPrimary (citable) accession number: Q8GR34
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: October 29, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)