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Protein

Beta-xylanase

Gene

xyn10A

Organism
Thermopolyspora flexuosa
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.
GH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Name:xyn10AImported
OrganismiThermopolyspora flexuosaImported
Taxonomic identifieri103836 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptosporangialesStreptosporangiaceaeThermopolyspora

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4444Sequence analysisAdd
BLAST
Chaini45 – 492448Beta-xylanaseSequence analysisPRO_5004306240Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ8GMV6.
SMRiQ8GMV6. Positions 45-489.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini43 – 343301GH10 (glycosyl hydrolase family 10)InterPro annotationAdd
BLAST
Domaini375 – 491117Ricin B-type lectinInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
SM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
PS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8GMV6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGVNAFPRPG ARRFTGGLYR ALAAATVSVV GVVTALTVTQ PASAAASTLA
60 70 80 90 100
EGAAQHNRYF GVAIAANRLN DSVYTNIANR EFNSVTAENE MKIDATEPQQ
110 120 130 140 150
GRFDFTQADR IYNWARQNGK QVRGHTLAWH SQQPQWMQNL SGQALRQAMI
160 170 180 190 200
NHIQGVMSYY RGKIPIWDVV NEAFEDGNSG RRRDSNLQRT GNDWIEVAFR
210 220 230 240 250
TARQADPSAK LCYNDYNIEN WNAAKTQAVY NMVRDFKSRG VPIDCVGFQS
260 270 280 290 300
HFNSGNPYNP NFRTTLQQFA ALGVDVEVTE LDIENAPAQT YASVIRDCLA
310 320 330 340 350
VDRCTGITVW GVRDSDSWRS YQNPLLFDNN GNKKQAYYAV LDALNEGSDD
360 370 380 390 400
GGGPSNPPVS PPPGGGSGQI RGVASNRCID VPNGNTADGT QVQLYDCHSG
410 420 430 440 450
SNQQWTYTSS GEFRIFGNKC LDAGGSSNGA VVQIYSCWGG ANQKWELRAD
460 470 480 490
GTIVGVQSGL CLDAVGGGTG NGTRLQLYSC WGGNNQKWSY NA
Length:492
Mass (Da):53,598
Last modified:February 15, 2005 - v2
Checksum:i3690911A92BC5248
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ508953 Genomic DNA. Translation: CAD48748.2.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ508953 Genomic DNA. Translation: CAD48748.2.

3D structure databases

ProteinModelPortaliQ8GMV6.
SMRiQ8GMV6. Positions 45-489.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.
GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
SM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
PS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Thermostable xylanases, Xyn10A and Xyn11A, from the actinomycete Nonomuraea flexuosa: isolation of the genes and characterization of recombinant Xyn11A polypeptides produced in Trichoderma reesei."
    Leskinen S., Mantyla A., Fagerstrom R., Vehmaanpera J., Lantto R., Paloheimo M., Suominen P.
    Appl. Microbiol. Biotechnol. 67:495-505(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ8GMV6_9ACTN
AccessioniPrimary (citable) accession number: Q8GMV6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: February 15, 2005
Last modified: April 13, 2016
This is version 60 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.