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Q8GIR9 (Q8GIR9_SYNE7) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names

Uncharacterized protein EMBL AAN71791.1
Gene names
Name:SEB0053 EMBL AAN71791.1
Ordered Locus Names:Synpcc7942_2473 EMBL ABB58503.1
OrganismSynechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2) [Complete proteome] [HAMAP] EMBL AAN71791.1
Taxonomic identifier1140 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length462 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8GIR9 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 59BE5E22CEE690AF

FASTA46251,194
        10         20         30         40         50         60 
MTTLPYFQPA ASPASAGEGS ASLSPVIALK DLVARLDREQ RKAQELLASL GFALRSFTNL 

        70         80         90        100        110        120 
GQFLELIPLI ASRVTDTEGS LLLTFRPDGR FWQAQLHCTD PRLAETLNRI PASLPVGTAP 

       130        140        150        160        170        180 
SGSPTEAIAE IDRQVQRCLG RNAQLFATAV LVRNQARGRL YVFSLDGQYS WNESRQKLVR 

       190        200        210        220        230        240 
LVADQTAVAI ENDALTTELR QKERLDRELE IGAEIQLQLL PSQCPAIEGL EIAAACRTAS 

       250        260        270        280        290        300 
RVGGDYYDFI PTRTHSDEQG RLQPDAGSPW AIAIGDIMGK GVPAGLIMTM LRGMLRAEVL 

       310        320        330        340        350        360 
NRHRPSRVLA HLNQVIYADL EHSNRFATLF YSEYDPSSRL LTFSNAAHNP PLLWQQATGT 

       370        380        390        400        410        420 
LKRLDTFGMM IGLEADNAYA EQHVQLQPGD VVLYYTDGLT DAADPRGNRF DEENVAIAFR 

       430        440        450        460 
EACRRRLSAE ALLADLFNRV QRFIGPDRHN EDDMTLVVLR AV 

« Hide

References

« Hide 'large scale' references
[1]"Regulation of the aromatic pathway in the cyanobacterium Synechococcus sp. strain Pcc6301 (Anacystis nidulans)."
Hall G.C., Flick M.B., Jensen R.A.
J. Bacteriol. 153:423-428(1983) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Synechococcus elongatus PCC7942 genome sequence, cosmid 7H1 and 2E8."
Holtman C.K., Socias T., Mohler B.J., Chen Y., Min H., Golden S.S., Youderian P., Sandoval P., Gonzalez A., Salinas I.
Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Complete sequence of chromosome 1 of Synechococcus elongatus PCC 7942."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 7942.
[4]US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Schmutz J., Larimer F., Land M., Lykidis A., Golden S., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: PCC 7942 EMBL ABB58503.1.
[5]"Complete sequence of chromosome 1 of Synechococcus elongatus PCC 7942."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Golden S., Richardson P.
Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: PCC 7942 EMBL ABB58503.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U30252 Genomic DNA. Translation: AAN71791.1.
CP000100 Genomic DNA. Translation: ABB58503.1.
RefSeqYP_401490.1. NC_007604.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING1140.Synpcc7942_2473.

Protocols and materials databases

DNASU3774493.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB58503; ABB58503; Synpcc7942_2473.
GeneID3774493.
KEGGsyf:Synpcc7942_2473.
PATRIC23790519. VBISynElo51371_2771.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2208.
HOGENOMHOG000232401.
KOK07315.
OrthoDBEOG6ZH2CT.

Enzyme and pathway databases

BioCycSYNEL:SYNPCC7942_2473-MONOMER.

Family and domain databases

Gene3D3.30.450.40. 1 hit.
3.60.40.10. 1 hit.
InterProIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMSSF55781. SSF55781. 1 hit.
SSF81606. SSF81606. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ8GIR9_SYNE7
AccessionPrimary (citable) accession number: Q8GIR9
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 9, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)