Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

dTDP-4-dehydrorhamnose 3,5-epimerase

Gene

rmlC

Organism
Streptococcus suis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Enzyme and pathway databases

SABIO-RKQ8GIQ0.

Names & Taxonomyi

Protein namesi
Submitted name:
dTDP-4-dehydrorhamnose 3,5-epimeraseImported (EC:5.1.3.13Imported)
Gene namesi
Name:rmlCImported
OrganismiStreptococcus suisImported
Taxonomic identifieri1307 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Interactioni

Protein-protein interaction databases

STRINGi391295.SSU05_1300.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1NXMX-ray1.30A/B1-197[»]
1NYWX-ray1.60A/B1-197[»]
1NZCX-ray1.80A/B/C/D1-197[»]
2IXLX-ray1.60A/B/C/D1-197[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8GIQ0.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108URP. Bacteria.
COG1898. LUCA.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR000888. dTDP_sugar_isom.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PANTHERiPTHR21047. PTHR21047. 1 hit.
PfamiPF00908. dTDP_sugar_isom. 1 hit.
[Graphical view]
ProDomiPD001462. dTDP_sugar_isom. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF51182. SSF51182. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8GIQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTENFFGKTL AARPVEAIPG MLEFDIPVHG DNRGWFKENF QKEKMLPLGF
60 70 80 90 100
PESFFAEGKL QNNVSFSRKN VLRGLHAEPW DKYISVADGG KVLGTWVDLR
110 120 130 140 150
EGETFGNTYQ TVIDASKSIF VPRGVANGFQ VLSDFVAYSY LVNDYWALEL
160 170 180 190
KPKYAFVNYA DPSLDIKWEN LEEAEVSEAD ENHPFLKDVK PLRKEDL
Length:197
Mass (Da):22,463
Last modified:March 1, 2003 - v1
Checksum:iBCA3BD7C8FC4785A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ509828 Genomic DNA. Translation: CAD49091.1.
RefSeqiWP_012027248.1. NZ_LDOM01000039.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ509828 Genomic DNA. Translation: CAD49091.1.
RefSeqiWP_012027248.1. NZ_LDOM01000039.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1NXMX-ray1.30A/B1-197[»]
1NYWX-ray1.60A/B1-197[»]
1NZCX-ray1.80A/B/C/D1-197[»]
2IXLX-ray1.60A/B/C/D1-197[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi391295.SSU05_1300.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4108URP. Bacteria.
COG1898. LUCA.

Enzyme and pathway databases

SABIO-RKQ8GIQ0.

Miscellaneous databases

EvolutionaryTraceiQ8GIQ0.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR000888. dTDP_sugar_isom.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PANTHERiPTHR21047. PTHR21047. 1 hit.
PfamiPF00908. dTDP_sugar_isom. 1 hit.
[Graphical view]
ProDomiPD001462. dTDP_sugar_isom. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF51182. SSF51182. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ8GIQ0_STRSU
AccessioniPrimary (citable) accession number: Q8GIQ0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: March 16, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.