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Protein
Submitted name:

dTDP-4-dehydrorhamnose 3,5-epimerase

Gene

rmlC

Organism
Streptococcus suis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionIsomeraseImported

Enzyme and pathway databases

SABIO-RKiQ8GIQ0.

Names & Taxonomyi

Protein namesi
Submitted name:
dTDP-4-dehydrorhamnose 3,5-epimeraseImported (EC:5.1.3.13Imported)
Gene namesi
Name:rmlCImported
OrganismiStreptococcus suisImported
Taxonomic identifieri1307 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Pathology & Biotechi

Chemistry databases

DrugBankiDB03751. 2'deoxy-Thymidine-5'-Diphospho-Alpha-D-Glucose.
DB03161. Thymidine-5'-Diphospho-Beta-D-Xylose.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1NXMX-ray1.30A/B1-197[»]
1NYWX-ray1.60A/B1-197[»]
1NZCX-ray1.80A/B/C/D1-197[»]
2IXLX-ray1.60A/B/C/D1-197[»]
SMRiQ8GIQ0.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8GIQ0.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108URP. Bacteria.
COG1898. LUCA.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiView protein in InterPro
IPR000888. dTDP_sugar_isom.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
PANTHERiPTHR21047. PTHR21047. 1 hit.
PfamiView protein in Pfam
PF00908. dTDP_sugar_isom. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD001462. dTDP_sugar_isom. 1 hit.
SUPFAMiSSF51182. SSF51182. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8GIQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTENFFGKTL AARPVEAIPG MLEFDIPVHG DNRGWFKENF QKEKMLPLGF
60 70 80 90 100
PESFFAEGKL QNNVSFSRKN VLRGLHAEPW DKYISVADGG KVLGTWVDLR
110 120 130 140 150
EGETFGNTYQ TVIDASKSIF VPRGVANGFQ VLSDFVAYSY LVNDYWALEL
160 170 180 190
KPKYAFVNYA DPSLDIKWEN LEEAEVSEAD ENHPFLKDVK PLRKEDL
Length:197
Mass (Da):22,463
Last modified:March 1, 2003 - v1
Checksum:iBCA3BD7C8FC4785A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ509828 Genomic DNA. Translation: CAD49091.1.
RefSeqiWP_012027248.1. NZ_MNPY01000004.1.

Genome annotation databases

PATRICifig|1307.469.peg.1424.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ8GIQ0_STRSU
AccessioniPrimary (citable) accession number: Q8GIQ0
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 5, 2017
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources