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Protein
Submitted name:

Cytochrome C

Gene

ppcA

Organism
Geobacter sulfurreducens
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi37 – 371Iron (heme 1 axial ligand); via tele nitrogenCombined sources
Metal bindingi37 – 371Iron (heme 4 axial ligand); via tele nitrogenCombined sources
Metal bindingi40 – 401Iron (heme 3 axial ligand); via tele nitrogenCombined sources
Metal bindingi40 – 401Iron (heme 5 axial ligand); via tele nitrogenCombined sources
Binding sitei47 – 471Heme 1 (covalent)Combined sources
Binding sitei47 – 471Heme 4 (covalent)Combined sources
Binding sitei50 – 501Heme 1 (covalent)Combined sources
Binding sitei50 – 501Heme 4 (covalent)Combined sources
Metal bindingi51 – 511Iron (heme 1 axial ligand); via tele nitrogenCombined sources
Metal bindingi51 – 511Iron (heme 4 axial ligand); via tele nitrogenCombined sources
Metal bindingi67 – 671Iron (heme 2 axial ligand); via tele nitrogenCombined sources
Binding sitei71 – 711Heme 3 (covalent)Combined sources
Binding sitei71 – 711Heme 5 (covalent)Combined sources
Binding sitei74 – 741Heme 3 (covalent)Combined sources
Binding sitei74 – 741Heme 5 (covalent)Combined sources
Metal bindingi75 – 751Iron (heme 3 axial ligand); via tele nitrogenCombined sources
Metal bindingi75 – 751Iron (heme 5 axial ligand); via tele nitrogenCombined sources
Binding sitei85 – 851Heme 2 (covalent)Combined sources
Binding sitei88 – 881Heme 2 (covalent)Combined sources
Metal bindingi89 – 891Iron (heme 2 axial ligand); via tele nitrogenCombined sources

GO - Molecular functioni

  • electron carrier activity Source: TIGR
  • heme binding Source: InterPro
  • metal ion binding Source: UniProtKB-KW

GO - Biological processi

  • sulfur utilization Source: TIGR
Complete GO annotation...

Keywords - Ligandi

HemeCombined sources, Iron, Metal-binding

Protein family/group databases

TCDBi5.B.3.1.1. the geobacter nanowire electron transfer (g-net) family.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome CImported
Submitted name:
PpcAImported
Gene namesi
Name:ppcAImported
ORF Names:RW64_12645Imported
OrganismiGeobacter sulfurreducensImported
Taxonomic identifieri35554 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
Proteomesi
  • UP000032622 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 9171Sequence analysisPRO_5007713176Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi243231.GSU0612.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1OS6X-ray1.45A21-91[»]
2LDONMR-A21-91[»]
2MZ9NMR-A21-91[»]
3SELX-ray2.10X21-91[»]
3SJ0X-ray2.00X21-91[»]
3SJ1X-ray1.90X21-91[»]
3SJ4X-ray1.90X21-91[»]
4HAJX-ray1.90A21-91[»]
4HB6X-ray1.90A21-91[»]
4HB8X-ray1.90A21-91[»]
4HBFX-ray1.90A21-91[»]
4HC3X-ray1.95A21-91[»]
4HDLX-ray1.90A21-91[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8GGK7.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini28 – 6134Cytochrom_CIIIInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410631R. Bacteria.
ENOG4112C6P. LUCA.
HOGENOMiHOG000136348.

Family and domain databases

InterProiIPR002322. Cyt_c_III.
IPR020942. Cyt_c_III_dom.
IPR011031. Multihaem_cyt.
[Graphical view]
PfamiPF02085. Cytochrom_CIII. 1 hit.
[Graphical view]
PRINTSiPR00609. CYTOCHROMEC3.
SUPFAMiSSF48695. SSF48695. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q8GGK7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKVIASLAL SVFCAGLAFA ADDIVLKAKN GDVKFPHKAH QKAVPDCKKC
60 70 80 90
HEKGPGKIEG FGKEMAHGKG CKGCHEEMKK GPTKCGECHK K
Length:91
Mass (Da):9,748
Last modified:March 1, 2003 - v1
Checksum:iC87AB91F7834E086
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei91 – 911Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF505790 Genomic DNA. Translation: AAN40982.1.
CP010430 Genomic DNA. Translation: AJY70365.1.
RefSeqiWP_010941274.1. NZ_CP010430.1.

Genome annotation databases

EnsemblBacteriaiAJY70365; AJY70365; RW64_12645.
PATRICi22023977. VBIGeoSul17553_0611.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF505790 Genomic DNA. Translation: AAN40982.1.
CP010430 Genomic DNA. Translation: AJY70365.1.
RefSeqiWP_010941274.1. NZ_CP010430.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1OS6X-ray1.45A21-91[»]
2LDONMR-A21-91[»]
2MZ9NMR-A21-91[»]
3SELX-ray2.10X21-91[»]
3SJ0X-ray2.00X21-91[»]
3SJ1X-ray1.90X21-91[»]
3SJ4X-ray1.90X21-91[»]
4HAJX-ray1.90A21-91[»]
4HB6X-ray1.90A21-91[»]
4HB8X-ray1.90A21-91[»]
4HBFX-ray1.90A21-91[»]
4HC3X-ray1.95A21-91[»]
4HDLX-ray1.90A21-91[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243231.GSU0612.

Protein family/group databases

TCDBi5.B.3.1.1. the geobacter nanowire electron transfer (g-net) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAJY70365; AJY70365; RW64_12645.
PATRICi22023977. VBIGeoSul17553_0611.

Phylogenomic databases

eggNOGiENOG410631R. Bacteria.
ENOG4112C6P. LUCA.
HOGENOMiHOG000136348.

Miscellaneous databases

EvolutionaryTraceiQ8GGK7.

Family and domain databases

InterProiIPR002322. Cyt_c_III.
IPR020942. Cyt_c_III_dom.
IPR011031. Multihaem_cyt.
[Graphical view]
PfamiPF02085. Cytochrom_CIII. 1 hit.
[Graphical view]
PRINTSiPR00609. CYTOCHROMEC3.
SUPFAMiSSF48695. SSF48695. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ8GGK7_GEOSN
AccessioniPrimary (citable) accession number: Q8GGK7
Secondary accession number(s): Q74FJ6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 6, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.