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Q8GGH0 (Q8GGH0_9ENTR) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:esp1396IC EMBL AAO16093.1
Encoded onPlasmid pEsp1396 Ref.1 EMBL AAO16093.1
OrganismEnterobacter sp. RFL1396 EMBL AAO16093.1
Taxonomic identifier211595 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEnterobacter

Protein attributes

Sequence length79 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region24 – 252Sulfate 2 binding PDB 4I6R PDB 4IA8

Sites

Binding site171Sulfate 1 PDB 4F8D
Binding site241Sulfate 1; via amide nitrogen PDB 4F8D
Binding site251Sulfate 3 PDB 4I6R
Binding site351Sulfate 2 PDB 4I6R PDB 4IA8
Binding site351Sulfate 4 PDB 4F8D PDB 4I6R
Binding site391Sulfate 4 PDB 4F8D PDB 4I6R
Binding site431Sulfate 4 PDB 4F8D PDB 4I6R
Binding site631Acetate PDB 4I6U
Binding site781Sulfate 5 PDB 4F8D

Sequences

Sequence LengthMass (Da)Tools
Q8GGH0 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: B4DDF13A4F9E6998

FASTA799,225
        10         20         30         40         50         60 
MESFLLSKVS FVIKKIRLEK GMTQEDLAYK SNLDRTYISG IERNSRNLTI KSLELIMKGL 

        70 
EVSDVVFFEM LIKEILKHD 

« Hide

References

[1]"Esp1396I restriction-modification system: structural organization and mode of regulation."
Cesnaviciene E., Mitkaite G., Stankevicius K., Janulaitis A., Lubys A.
Nucleic Acids Res. 31:743-749(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: RFL1396 EMBL AAO16093.1.
[2]"Structural analysis of the genetic switch that regulates the expression of restriction-modification genes."
McGeehan J.E., Streeter S.D., Thresh S.J., Ball N., Ravelli R.B., Kneale G.G.
Nucleic Acids Res. 36:4778-4787(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS).
[3]"Structure of the restriction-modification controller protein C.Esp1396I."
Ball N., Streeter S.D., Kneale G.G., McGeehan J.E.
Acta Crystallogr. D 65:900-905(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS).
[4]"Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex."
McGeehan J.E., Ball N.J., Streeter S.D., Thresh S.J., Kneale G.G.
Nucleic Acids Res. 40:4158-4167(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS).
[5]"The structural basis of differential DNA sequence recognition by restriction-modification controller proteins."
Ball N.J., McGeehan J.E., Streeter S.D., Thresh S.J., Kneale G.G.
Nucleic Acids Res. 40:10532-10542(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS).
[6]"Structural and mutagenic analysis of C.Esp1396I."
McGeehan J.E., Streeter S.D., Thresh S.J., Ball N., Ravelli R.B., Kneale G.G.
Submitted (MAY-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS).
[7]"Structural and Functional Analysis of Mutants of a Bacterial RM Controller Protein."
Martin R.N.A., McGeehan J.E., Kneale G.G.
Submitted (JUN-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.79 ANGSTROMS) IN COMPLEX WITH SULFATE.
[8]"Mutagenic and crystallographic analysis of the controller protein C.Esp1396I."
Martin R.N.A., McGeehan J.E., Kneale G.G.
Submitted (NOV-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS).
[9]"Mutagenic and crystallographic analysis of the controller protein C.Esp1396I."
Martin R.N.A., McGeehan J.E., Kneale G.G.
Submitted (DEC-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.85 ANGSTROMS) IN COMPLEX WITH SULFATE.
[10]"Structural analysis of DNA-protein complexes regulating the restriction-modification system Esp1396I."
Martin R.N., McGeehan J.E., Ball N.J., Streeter S.D., Thresh S.J., Kneale G.G.
Acta Crystallogr. F 69:962-966(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS).
[11]"Mutagenic and crystallographic analysis of the controller protein C.Esp1396I."
Martin R.N.A., McGeehan J.E., Kneale G.G.
Submitted (JAN-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (3.10 ANGSTROMS).
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF527822 Genomic DNA. Translation: AAO16093.1.
RefSeqNP_862207.1. NC_004936.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3CLCX-ray2.80A/B/C/D1-79[»]
3FYAX-ray3.00A/B1-79[»]
3G5GX-ray2.80A/B/C/D/E/F/G/H/I/J/K/L/M/N1-79[»]
3S8QX-ray2.10A/B1-79[»]
3UFDX-ray2.80A/B/E/F1-79[»]
4F8DX-ray1.50A/B1-79[»]
4FBIX-ray1.50A/B/C/D1-79[»]
4FN3X-ray1.79A/B1-79[»]
4I6RX-ray1.38A/B1-79[»]
4I6TX-ray2.00A/B1-79[»]
4I6UX-ray1.97A/B/C/D/E/F1-79[»]
4I8TX-ray3.00A/B1-79[»]
4IA8X-ray1.85A/B1-79[»]
4IVZX-ray3.10A/B/E/F1-79[»]
4IWRX-ray2.40A/B/E/F1-79[»]
ProteinModelPortalQ8GGH0.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

REBASE17355. C.Esp1396I.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1482839.

Family and domain databases

Gene3D1.10.260.40. 1 hit.
InterProIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
[Graphical view]
PfamPF01381. HTH_3. 1 hit.
[Graphical view]
SMARTSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMSSF47413. SSF47413. 1 hit.
PROSITEPS50943. HTH_CROC1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ8GGH0.

Entry information

Entry nameQ8GGH0_9ENTR
AccessionPrimary (citable) accession number: Q8GGH0
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: March 19, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)