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Q8GGH0

- Q8GGH0_9ENTR

UniProt

Q8GGH0 - Q8GGH0_9ENTR

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Protein
Submitted name:

Regulatory protein

Gene

esp1396IC

Organism
Enterobacter sp. RFL1396
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei17 – 171Sulfate 1Imported
Binding sitei24 – 241Sulfate 1; via amide nitrogenImported
Binding sitei25 – 251Sulfate 3Imported
Binding sitei35 – 351Sulfate 2Imported
Binding sitei35 – 351Sulfate 4Imported
Binding sitei39 – 391Sulfate 4Imported
Binding sitei43 – 431Sulfate 4Imported
Binding sitei63 – 631AcetateImported
Binding sitei78 – 781Sulfate 5Imported

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
Complete GO annotation...

Protein family/group databases

REBASEi17355. C.Esp1396I.

Names & Taxonomyi

Protein namesi
Submitted name:
Regulatory proteinImported
Gene namesi
Name:esp1396ICImported
Encoded oniPlasmid pEsp1396Imported
OrganismiEnterobacter sp. RFL1396Imported
Taxonomic identifieri211595 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEnterobacter

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3CLCX-ray2.80A/B/C/D1-79[»]
3FYAX-ray3.00A/B1-79[»]
3G5GX-ray2.80A/B/C/D/E/F/G/H/I/J/K/L/M/N1-79[»]
3S8QX-ray2.10A/B1-79[»]
3UFDX-ray2.80A/B/E/F1-79[»]
4F8DX-ray1.50A/B1-79[»]
4FBIX-ray1.50A/B/C/D1-79[»]
4FN3X-ray1.79A/B1-79[»]
4I6RX-ray1.38A/B1-79[»]
4I6TX-ray2.00A/B1-79[»]
4I6UX-ray1.97A/B/C/D/E/F1-79[»]
4I8TX-ray3.00A/B1-79[»]
4IA8X-ray1.85A/B1-79[»]
4IVZX-ray3.10A/B/E/F1-79[»]
4IWRX-ray2.40A/B/E/F1-79[»]
ProteinModelPortaliQ8GGH0.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8GGH0.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni24 – 252Sulfate 2 bindingImported

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
[Graphical view]
PfamiPF01381. HTH_3. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
PROSITEiPS50943. HTH_CROC1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8GGH0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MESFLLSKVS FVIKKIRLEK GMTQEDLAYK SNLDRTYISG IERNSRNLTI
60 70
KSLELIMKGL EVSDVVFFEM LIKEILKHD
Length:79
Mass (Da):9,225
Last modified:March 1, 2003 - v1
Checksum:iB4DDF13A4F9E6998
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF527822 Genomic DNA. Translation: AAO16093.1.
RefSeqiNP_862207.1. NC_004936.1.
WP_011116951.1. NC_004936.1.

Genome annotation databases

GeneIDi1482839.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF527822 Genomic DNA. Translation: AAO16093.1 .
RefSeqi NP_862207.1. NC_004936.1.
WP_011116951.1. NC_004936.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3CLC X-ray 2.80 A/B/C/D 1-79 [» ]
3FYA X-ray 3.00 A/B 1-79 [» ]
3G5G X-ray 2.80 A/B/C/D/E/F/G/H/I/J/K/L/M/N 1-79 [» ]
3S8Q X-ray 2.10 A/B 1-79 [» ]
3UFD X-ray 2.80 A/B/E/F 1-79 [» ]
4F8D X-ray 1.50 A/B 1-79 [» ]
4FBI X-ray 1.50 A/B/C/D 1-79 [» ]
4FN3 X-ray 1.79 A/B 1-79 [» ]
4I6R X-ray 1.38 A/B 1-79 [» ]
4I6T X-ray 2.00 A/B 1-79 [» ]
4I6U X-ray 1.97 A/B/C/D/E/F 1-79 [» ]
4I8T X-ray 3.00 A/B 1-79 [» ]
4IA8 X-ray 1.85 A/B 1-79 [» ]
4IVZ X-ray 3.10 A/B/E/F 1-79 [» ]
4IWR X-ray 2.40 A/B/E/F 1-79 [» ]
ProteinModelPortali Q8GGH0.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

REBASEi 17355. C.Esp1396I.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 1482839.

Miscellaneous databases

EvolutionaryTracei Q8GGH0.

Family and domain databases

Gene3Di 1.10.260.40. 1 hit.
InterProi IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
[Graphical view ]
Pfami PF01381. HTH_3. 1 hit.
[Graphical view ]
SMARTi SM00530. HTH_XRE. 1 hit.
[Graphical view ]
SUPFAMi SSF47413. SSF47413. 1 hit.
PROSITEi PS50943. HTH_CROC1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Esp1396I restriction-modification system: structural organization and mode of regulation."
    Cesnaviciene E., Mitkaite G., Stankevicius K., Janulaitis A., Lubys A.
    Nucleic Acids Res. 31:743-749(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: RFL1396Imported.
    Plasmid: pEsp1396
  2. "Structural analysis of the genetic switch that regulates the expression of restriction-modification genes."
    McGeehan J.E., Streeter S.D., Thresh S.J., Ball N., Ravelli R.B., Kneale G.G.
    Nucleic Acids Res. 36:4778-4787(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS).
  3. "Structure of the restriction-modification controller protein C.Esp1396I."
    Ball N., Streeter S.D., Kneale G.G., McGeehan J.E.
    Acta Crystallogr. D 65:900-905(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS).
  4. "Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex."
    McGeehan J.E., Ball N.J., Streeter S.D., Thresh S.J., Kneale G.G.
    Nucleic Acids Res. 40:4158-4167(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS).
  5. "The structural basis of differential DNA sequence recognition by restriction-modification controller proteins."
    Ball N.J., McGeehan J.E., Streeter S.D., Thresh S.J., Kneale G.G.
    Nucleic Acids Res. 40:10532-10542(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS).
  6. "Structural analysis of DNA-protein complexes regulating the restriction-modification system Esp1396I."
    Martin R.N., McGeehan J.E., Ball N.J., Streeter S.D., Thresh S.J., Kneale G.G.
    Acta Crystallogr. F 69:962-966(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS).
  7. "Structural and mutagenic analysis of the RM controller protein C.Esp1396I."
    Martin R.N., McGeehan J.E., Kneale G.
    PLoS ONE 9:e98365-e98365(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.38 ANGSTROMS).

Entry informationi

Entry nameiQ8GGH0_9ENTR
AccessioniPrimary (citable) accession number: Q8GGH0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: October 29, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, PlasmidImported

External Data

Dasty 3