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Q8G7R0 (Q8G7R0_BIFLO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BL0187
OrganismBifidobacterium longum (strain NCC 2705)
Taxonomic identifier206672 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium

Protein attributes

Sequence length344 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q8G7R0 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: C93CD60F8E1C9A6F

FASTA34438,423
        10         20         30         40         50         60 
MTVYNNPIVL QRADPWVLKV DGEYWFTASD PEYDKIAIRH ASTINDLQKA PETVVWRKHE 

        70         80         90        100        110        120 
SGVCSKYIWA PELHRVNGAW YIYFAGAEHE FEPNGMPTHR MFVLENTDAD PTTDNWVEKG 

       130        140        150        160        170        180 
QIVTPMDSFS LDATTEVIDG VQYLVWAQKD YDIPGNSNLY IAPMANPWTL AADPVMLTKP 

       190        200        210        220        230        240 
EYDWECIDFL VNEGPAFLFH DDKIFITYSA SGTGVPYAVG LLTADRGSDL MDPKSWTKSP 

       250        260        270        280        290        300 
VPVFKTCAEN GQYGPGHNSF TKSEDDSEDL MIYHARNYTE IKGDPLFDPN RHARVGVVRW 

       310        320        330        340 
NEDGTPDFGV PEPDNLWTPV TTDVLPPDGG PKAGTPAVGL AAEA 

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References

[1]"The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract."
Schell M.A., Karmirantzou M., Snel B., Vilanova D., Berger B., Pessi G., Zwahlen M.-C., Desiere F., Bork P., Delley M., Pridmore R.D., Arigoni F.
Proc. Natl. Acad. Sci. U.S.A. 99:14422-14427(2002) [PubMed: 12381787] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCC 2705.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE014295 Genomic DNA. Translation: AAN24041.1.
RefSeqNP_695405.1. NC_004307.2.

3D structure databases

ProteinModelPortalQ8G7R0.
SMRQ8G7R0. Positions 6-320.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1022964.
GenomeReviewsGene locus BL0187 in contig AE014295_GR.
KEGGblo:BL0187.
NMPDRfig|206672.1.peg.174.
PATRIC21120102. VBIBifLon107831_1487.

Phylogenomic databases

HOGENOMHBG348165.
OMAEFDRIEL.
ProtClustDBCLSK2393872.

Family and domain databases

InterProIPR016828. Alpha-L-arabinofuranosidase.
IPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_43_beta-prop.
[Graphical view]
Gene3DG3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
PANTHERPTHR22925. Glyco_hydro_43. 1 hit.
PfamPF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
PIRSFPIRSF025414. Alpha-L-arabinofuranosidase. 1 hit.
SUPFAMSSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ8G7R0_BIFLO
AccessionPrimary (citable) accession number: Q8G7R0
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)