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Q8G5L0

- GLGB_BIFLO

UniProt

Q8G5L0 - GLGB_BIFLO

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Bifidobacterium longum (strain NCC 2705)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 82 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Functioni

    Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei418 – 4181NucleophileUniRule annotation
    Active sitei471 – 4711Proton donorUniRule annotation

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

    Enzyme and pathway databases

    BioCyciBLON206672:GI1E-666-MONOMER.
    UniPathwayiUPA00164.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
    Alternative name(s):
    1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
    Alpha-(1->4)-glucan branching enzymeUniRule annotation
    Glycogen branching enzymeUniRule annotation
    Short name:
    BEUniRule annotation
    Gene namesi
    Name:glgBUniRule annotation
    Ordered Locus Names:BL0999
    OrganismiBifidobacterium longum (strain NCC 2705)
    Taxonomic identifieri206672 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
    ProteomesiUP000000439: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7377371,4-alpha-glucan branching enzyme GlgBPRO_0000188684Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi206672.BL0999.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8G5L0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0296.
    HOGENOMiHOG000283037.
    KOiK00700.
    OMAiISEGRHE.
    OrthoDBiEOG6JX7GT.
    PhylomeDBiQ8G5L0.

    Family and domain databases

    Gene3Di2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPiMF_00685. GlgB.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 2 hits.
    TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q8G5L0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPVAQGDLDA TSNAEFYNPH GVLGGHLGIG KHADTATIRV LRPLAKSVTI    50
    LTQDGEYPMT HEYNGVFVVT VPASGTKKQP TIPDYRVRTE WESGAVLIED 100
    DPYRYMPTVG DMDTYLFGEG RHEKLWETLG AHVLRYDDPM GGADGTPGEQ 150
    VVGTAFSVWA PNAHAVRVVG NFNAWDGRRH AMRELGSSGV WEIFIPGIGA 200
    GETYKFQILN ANYTWEMKAD PMERQHEVPP STASIVTEST YKWNDDAWMQ 250
    HRRTTNPHDG PVSIYEVHAG SWKQGLTYRD LAKQLVDYVK QEGFTHVEFM 300
    PLAQHPFSGS WGYQVTGYYA VDSRLGSPDD FRYLVDQFHQ AGIGVIMDWV 350
    PAHFPKDAFA LGRFDGTPLY EDPDPLRGEH PEWGTYVFNF GRREVRNFLV 400
    ANALFWLEDL HVDALRVDAV SSMLYLDYSR EPGHWRPNIY GGRENLEAID 450
    FLKEATATAY KNNPGVMVIA EESTAWPGIT APTSAGGIGF GMKWNMGWMH 500
    DTLEYLHEEP INRKWHHNEI TFSMVYAYSE HYVLPISHDE VVYGKGSLYG 550
    KMPGDDWQKL AGVRSMFAYQ WAHPGKKLSF MGNELAQWGE WDHDASIDWD 600
    CLNWQEHRQV QTMVADLNAF YKAHPALWSQ DFDPAGFQWL TSDDADHNTL 650
    SFLRIGTKGE TLAVVVNFSG EAWSDYQVAL PTGGKWTEVF TTDDAKYGGS 700
    DIHNGTFEAV EGEYHSRPFS AKITVPALGV VFLKPED 737
    Length:737
    Mass (Da):83,051
    Last modified:March 1, 2003 - v1
    Checksum:i035A1580871A21F9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE014295 Genomic DNA. Translation: AAN24807.1.
    RefSeqiNP_696171.1. NC_004307.2.

    Genome annotation databases

    EnsemblBacteriaiAAN24807; AAN24807; BL0999.
    GeneIDi1022518.
    KEGGiblo:BL0999.
    PATRICi21118473. VBIBifLon107831_0702.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE014295 Genomic DNA. Translation: AAN24807.1 .
    RefSeqi NP_696171.1. NC_004307.2.

    3D structure databases

    ProteinModelPortali Q8G5L0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 206672.BL0999.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAN24807 ; AAN24807 ; BL0999 .
    GeneIDi 1022518.
    KEGGi blo:BL0999.
    PATRICi 21118473. VBIBifLon107831_0702.

    Phylogenomic databases

    eggNOGi COG0296.
    HOGENOMi HOG000283037.
    KOi K00700.
    OMAi ISEGRHE.
    OrthoDBi EOG6JX7GT.
    PhylomeDBi Q8G5L0.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci BLON206672:GI1E-666-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPi MF_00685. GlgB.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 2 hits.
    TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract."
      Schell M.A., Karmirantzou M., Snel B., Vilanova D., Berger B., Pessi G., Zwahlen M.-C., Desiere F., Bork P., Delley M., Pridmore R.D., Arigoni F.
      Proc. Natl. Acad. Sci. U.S.A. 99:14422-14427(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NCC 2705.

    Entry informationi

    Entry nameiGLGB_BIFLO
    AccessioniPrimary (citable) accession number: Q8G5L0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 15, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 82 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3