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Protein

AAA ATPase forming ring-shaped complexes

Gene

arc

Organism
Bifidobacterium longum (strain NCC 2705)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi235 – 2406ATPUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciBLON206672:GI1E-1779-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
AAA ATPase forming ring-shaped complexesUniRule annotation
Short name:
ARCUniRule annotation
Gene namesi
Name:arcUniRule annotation
Ordered Locus Names:BL1794
OrganismiBifidobacterium longum (strain NCC 2705)
Taxonomic identifieri206672 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaBifidobacterialesBifidobacteriaceaeBifidobacterium
Proteomesi
  • UP000000439 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 521521AAA ATPase forming ring-shaped complexesPRO_0000396969Add
BLAST

Interactioni

Subunit structurei

Homohexamer. Assembles into a hexameric ring structure.UniRule annotation

Protein-protein interaction databases

STRINGi206672.BL1794.

Structurei

3D structure databases

ProteinModelPortaliQ8G3G6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili4 – 4441UniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the AAA ATPase family.UniRule annotation

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG4105DHM. Bacteria.
COG0464. LUCA.
HOGENOMiHOG000245286.
KOiK13527.
OMAiCVDEFKE.
OrthoDBiEOG6MH5BZ.
PhylomeDBiQ8G3G6.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_02112. ARC_ATPase.
InterProiIPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR027417. P-loop_NTPase.
IPR032501. Prot_ATP_ID_OB.
IPR022482. Proteasome_ATPase.
[Graphical view]
PfamiPF00004. AAA. 1 hit.
PF16450. Prot_ATP_ID_OB. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
TIGRFAMsiTIGR03689. pup_AAA. 1 hit.
PROSITEiPS00674. AAA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8G3G6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDTEDLAAL NDRLMAKNHA LAEALSRAGK ELTKAKSQLA QLAQPPLTFA
60 70 80 90 100
TMVKVDSTRT DEDGIQHASA EVISGTRRMV VPVASNVNAA RLTAGATVML
110 120 130 140 150
NEKLVLVEQR DADTVGQIRS VKQVLDDGRL IVTDASGNPV LIRRSGALAY
160 170 180 190 200
AGINQGDRII VDPSVRLAIE ALPAEGDKDL VLEETPDVTF ADIGGLDSEI
210 220 230 240 250
GRIRDAVQLP FQHRALFERY DLKPPKGVLL YGPPGNGKTM IAKAVANALC
260 270 280 290 300
EGGYDTNGDG SISPAETHVK GVFLSVKGPE LLNKYVGESE RLIRLIFQRA
310 320 330 340 350
RERAADGNPV VVFIDEMDSL LRTRGSGVSS DVETTIVPQF LSELDGVESL
360 370 380 390 400
DNVMVIGASN RVDMIDPAVL RPGRLDVKIR VGRPKTNQAI AIVDHYLTDD
410 420 430 440 450
LPLEDGVDAH ALSAVLVHDI YGTSERRHLC DVQEENGQWH ALFLADVVSG
460 470 480 490 500
AMLKNIVDRA KTRAVKESIE TGLDVALTVP LLAAAVEDEY RETRDSMADV
510 520
DPEQWSRING MDPIRRIRTA E
Length:521
Mass (Da):56,478
Last modified:March 1, 2003 - v1
Checksum:iF81C226BA583E331
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014295 Genomic DNA. Translation: AAN25577.1.
RefSeqiNP_696941.1. NC_004307.2.
WP_007053165.1. NC_004307.2.

Genome annotation databases

EnsemblBacteriaiAAN25577; AAN25577; BL1794.
GeneIDi1022113.
KEGGiblo:BL1794.
PATRICi21120858. VBIBifLon107831_1847.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014295 Genomic DNA. Translation: AAN25577.1.
RefSeqiNP_696941.1. NC_004307.2.
WP_007053165.1. NC_004307.2.

3D structure databases

ProteinModelPortaliQ8G3G6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi206672.BL1794.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN25577; AAN25577; BL1794.
GeneIDi1022113.
KEGGiblo:BL1794.
PATRICi21120858. VBIBifLon107831_1847.

Phylogenomic databases

eggNOGiENOG4105DHM. Bacteria.
COG0464. LUCA.
HOGENOMiHOG000245286.
KOiK13527.
OMAiCVDEFKE.
OrthoDBiEOG6MH5BZ.
PhylomeDBiQ8G3G6.

Enzyme and pathway databases

BioCyciBLON206672:GI1E-1779-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_02112. ARC_ATPase.
InterProiIPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR027417. P-loop_NTPase.
IPR032501. Prot_ATP_ID_OB.
IPR022482. Proteasome_ATPase.
[Graphical view]
PfamiPF00004. AAA. 1 hit.
PF16450. Prot_ATP_ID_OB. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
TIGRFAMsiTIGR03689. pup_AAA. 1 hit.
PROSITEiPS00674. AAA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract."
    Schell M.A., Karmirantzou M., Snel B., Vilanova D., Berger B., Pessi G., Zwahlen M.-C., Desiere F., Bork P., Delley M., Pridmore R.D., Arigoni F.
    Proc. Natl. Acad. Sci. U.S.A. 99:14422-14427(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NCC 2705.

Entry informationi

Entry nameiARC_BIFLO
AccessioniPrimary (citable) accession number: Q8G3G6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 10, 2010
Last sequence update: March 1, 2003
Last modified: July 6, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.