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Protein

50S ribosomal protein L30

Gene

rpmD

Organism
Brucella suis biovar 1 (strain 1330)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L30UniRule annotation
Gene namesi
Name:rpmDUniRule annotation
Ordered Locus Names:BR1215, BS1330_I1211
OrganismiBrucella suis biovar 1 (strain 1330)
Taxonomic identifieri204722 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000007104 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 656550S ribosomal protein L30PRO_0000347087Add
BLAST

Proteomic databases

PRIDEiQ8G089.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ8G089.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L30P family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000039916.
KOiK02907.
OMAiKVHHLVR.
OrthoDBiEOG6BGP7P.

Family and domain databases

Gene3Di3.30.1390.20. 1 hit.
HAMAPiMF_01371_B. Ribosomal_L30_B.
InterProiIPR005996. Ribosomal_L30_bac-type.
IPR016082. Ribosomal_L30_ferredoxin-like.
[Graphical view]
PfamiPF00327. Ribosomal_L30. 1 hit.
[Graphical view]
PIRSFiPIRSF002211. Ribosomal_L30_bac-type. 1 hit.
SUPFAMiSSF55129. SSF55129. 1 hit.
TIGRFAMsiTIGR01308. rpmD_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8G089-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEKKGKTVT VEQIGSPIRR PAEQRATLIG LGLNKMHRRS TLEDTPAVRG
60
MIAKLPHLVR VVDEA
Length:65
Mass (Da):7,172
Last modified:March 1, 2003 - v1
Checksum:iECF1FE335D6E15BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN30134.1.
CP002997 Genomic DNA. Translation: AEM18552.1.
PIRiAI3348.
RefSeqiWP_002967737.1. NZ_KN046804.1.

Genome annotation databases

EnsemblBacteriaiAAN30134; AAN30134; BR1215.
AEM18552; AEM18552; BS1330_I1211.
GeneIDi5380309.
KEGGibms:BR1215.
bsi:BS1330_I1211.
PATRICi17790767. VBIBruSui107850_1237.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN30134.1.
CP002997 Genomic DNA. Translation: AEM18552.1.
PIRiAI3348.
RefSeqiWP_002967737.1. NZ_KN046804.1.

3D structure databases

ProteinModelPortaliQ8G089.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ8G089.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN30134; AAN30134; BR1215.
AEM18552; AEM18552; BS1330_I1211.
GeneIDi5380309.
KEGGibms:BR1215.
bsi:BS1330_I1211.
PATRICi17790767. VBIBruSui107850_1237.

Phylogenomic databases

HOGENOMiHOG000039916.
KOiK02907.
OMAiKVHHLVR.
OrthoDBiEOG6BGP7P.

Family and domain databases

Gene3Di3.30.1390.20. 1 hit.
HAMAPiMF_01371_B. Ribosomal_L30_B.
InterProiIPR005996. Ribosomal_L30_bac-type.
IPR016082. Ribosomal_L30_ferredoxin-like.
[Graphical view]
PfamiPF00327. Ribosomal_L30. 1 hit.
[Graphical view]
PIRSFiPIRSF002211. Ribosomal_L30_bac-type. 1 hit.
SUPFAMiSSF55129. SSF55129. 1 hit.
TIGRFAMsiTIGR01308. rpmD_bact. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.

Entry informationi

Entry nameiRL30_BRUSU
AccessioniPrimary (citable) accession number: Q8G089
Secondary accession number(s): G0KAD6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: March 1, 2003
Last modified: November 11, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella suis
    Brucella suis (strain 1330): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.