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Protein

50S ribosomal protein L30

Gene

rpmD

Organism
Brucella suis biovar 1 (strain 1330)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L30UniRule annotation
Gene namesi
Name:rpmDUniRule annotation
Ordered Locus Names:BR1215, BS1330_I1211
OrganismiBrucella suis biovar 1 (strain 1330)
Taxonomic identifieri204722 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000000824: Chromosome I, UP000007104: Chromosome I

Subcellular locationi

GO - Cellular componenti

  1. large ribosomal subunit Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 656550S ribosomal protein L30PRO_0000347087Add
BLAST

Proteomic databases

PRIDEiQ8G089.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi204722.BR1215.

Structurei

3D structure databases

ProteinModelPortaliQ8G089.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L30P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1841.
HOGENOMiHOG000039916.
KOiK02907.
OMAiKVHHLVR.
OrthoDBiEOG6BGP7P.

Family and domain databases

Gene3Di3.30.1390.20. 1 hit.
HAMAPiMF_01371_B. Ribosomal_L30_B.
InterProiIPR005996. Ribosomal_L30_bac-type.
IPR016082. Ribosomal_L30_ferredoxin-like.
[Graphical view]
PfamiPF00327. Ribosomal_L30. 1 hit.
[Graphical view]
PIRSFiPIRSF002211. Ribosomal_L30_bac-type. 1 hit.
SUPFAMiSSF55129. SSF55129. 1 hit.
TIGRFAMsiTIGR01308. rpmD_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8G089-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAEKKGKTVT VEQIGSPIRR PAEQRATLIG LGLNKMHRRS TLEDTPAVRG
60
MIAKLPHLVR VVDEA
Length:65
Mass (Da):7,172
Last modified:March 1, 2003 - v1
Checksum:iECF1FE335D6E15BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN30134.1.
CP002997 Genomic DNA. Translation: AEM18552.1.
PIRiAI3348.
RefSeqiNP_698219.1. NC_004310.3.
YP_005616044.1. NC_017251.1.

Genome annotation databases

EnsemblBacteriaiAAN30134; AAN30134; BR1215.
AEM18552; AEM18552; BS1330_I1211.
GeneIDi1166891.
12138244.
KEGGibms:BR1215.
bsi:BS1330_I1211.
PATRICi17790767. VBIBruSui107850_1237.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN30134.1.
CP002997 Genomic DNA. Translation: AEM18552.1.
PIRiAI3348.
RefSeqiNP_698219.1. NC_004310.3.
YP_005616044.1. NC_017251.1.

3D structure databases

ProteinModelPortaliQ8G089.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi204722.BR1215.

Proteomic databases

PRIDEiQ8G089.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN30134; AAN30134; BR1215.
AEM18552; AEM18552; BS1330_I1211.
GeneIDi1166891.
12138244.
KEGGibms:BR1215.
bsi:BS1330_I1211.
PATRICi17790767. VBIBruSui107850_1237.

Phylogenomic databases

eggNOGiCOG1841.
HOGENOMiHOG000039916.
KOiK02907.
OMAiKVHHLVR.
OrthoDBiEOG6BGP7P.

Family and domain databases

Gene3Di3.30.1390.20. 1 hit.
HAMAPiMF_01371_B. Ribosomal_L30_B.
InterProiIPR005996. Ribosomal_L30_bac-type.
IPR016082. Ribosomal_L30_ferredoxin-like.
[Graphical view]
PfamiPF00327. Ribosomal_L30. 1 hit.
[Graphical view]
PIRSFiPIRSF002211. Ribosomal_L30_bac-type. 1 hit.
SUPFAMiSSF55129. SSF55129. 1 hit.
TIGRFAMsiTIGR01308. rpmD_bact. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.

Entry informationi

Entry nameiRL30_BRUSU
AccessioniPrimary (citable) accession number: Q8G089
Secondary accession number(s): G0KAD6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: March 1, 2003
Last modified: February 4, 2015
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella suis
    Brucella suis (strain 1330): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.