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Q8G088

- RL18_BRUSU

UniProt

Q8G088 - RL18_BRUSU

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Protein

50S ribosomal protein L18

Gene

rplR

Organism
Brucella suis biovar 1 (strain 1330)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L18UniRule annotation
Gene namesi
Name:rplRUniRule annotation
Ordered Locus Names:BR1217, BS1330_I1213
OrganismiBrucella suis biovar 1 (strain 1330)
Taxonomic identifieri204722 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000000824: Chromosome I, UP000007104: Chromosome I

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12012050S ribosomal protein L18PRO_0000131230Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.UniRule annotation

Protein-protein interaction databases

STRINGi204722.BR1217.

Structurei

3D structure databases

ProteinModelPortaliQ8G088.
SMRiQ8G088. Positions 23-120.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L18P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0256.
HOGENOMiHOG000248742.
KOiK02881.
OMAiIDDEKGH.
OrthoDBiEOG64NB48.

Family and domain databases

HAMAPiMF_01337_B. Ribosomal_L18_B.
InterProiIPR005484. Ribosomal_L18/L5.
IPR004389. Ribosomal_L18_bac-type.
[Graphical view]
PfamiPF00861. Ribosomal_L18p. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00060. L18_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8G088-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASPKETLQR RAARVRRQVK AVANGRPRLS VHRSSKNIYA QIIDDVRGVT
60 70 80 90 100
LAAASTLDGD LKGKLKTGAD SAAAAAVGKL VAERAVKAGV KDVVFDRSAF
110 120
IYHGRVKALA EAAREGGLSF
Length:120
Mass (Da):12,699
Last modified:March 1, 2003 - v1
Checksum:iD25D1B7693B03333
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN30136.1.
CP002997 Genomic DNA. Translation: AEM18554.1.
RefSeqiNP_698221.1. NC_004310.3.
YP_005616046.1. NC_017251.1.

Genome annotation databases

EnsemblBacteriaiAAN30136; AAN30136; BR1217.
AEM18554; AEM18554; BS1330_I1213.
GeneIDi1166893.
12138246.
KEGGibms:BR1217.
bsi:BS1330_I1213.
PATRICi17790771. VBIBruSui107850_1239.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN30136.1 .
CP002997 Genomic DNA. Translation: AEM18554.1 .
RefSeqi NP_698221.1. NC_004310.3.
YP_005616046.1. NC_017251.1.

3D structure databases

ProteinModelPortali Q8G088.
SMRi Q8G088. Positions 23-120.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 204722.BR1217.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAN30136 ; AAN30136 ; BR1217 .
AEM18554 ; AEM18554 ; BS1330_I1213 .
GeneIDi 1166893.
12138246.
KEGGi bms:BR1217.
bsi:BS1330_I1213.
PATRICi 17790771. VBIBruSui107850_1239.

Phylogenomic databases

eggNOGi COG0256.
HOGENOMi HOG000248742.
KOi K02881.
OMAi IDDEKGH.
OrthoDBi EOG64NB48.

Family and domain databases

HAMAPi MF_01337_B. Ribosomal_L18_B.
InterProi IPR005484. Ribosomal_L18/L5.
IPR004389. Ribosomal_L18_bac-type.
[Graphical view ]
Pfami PF00861. Ribosomal_L18p. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00060. L18_bact. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.

Entry informationi

Entry nameiRL18_BRUSU
AccessioniPrimary (citable) accession number: Q8G088
Secondary accession number(s): G0KAD8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: March 1, 2003
Last modified: October 1, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella suis
    Brucella suis (strain 1330): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3