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Protein

50S ribosomal protein L10

Gene

rplJ

Organism
Brucella suis biovar 1 (strain 1330)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L10UniRule annotation
Gene namesi
Name:rplJUniRule annotation
Ordered Locus Names:BR1246, BS1330_I1242
OrganismiBrucella suis biovar 1 (strain 1330)
Taxonomic identifieri204722 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000007104 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 17217250S ribosomal protein L10PRO_0000154601Add
BLAST

Interactioni

Subunit structurei

Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ8G067.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L10P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0244.
HOGENOMiHOG000004852.
KOiK02864.
OMAiGVYIRVV.
OrthoDBiEOG6DNTDR.

Family and domain databases

HAMAPiMF_00362. Ribosomal_L10.
InterProiIPR022973. Ribosomal_L10.
IPR002363. Ribosomal_L10_eubac_CS.
IPR001790. Ribosomal_L10P.
[Graphical view]
PfamiPF00466. Ribosomal_L10. 1 hit.
[Graphical view]
PROSITEiPS01109. RIBOSOMAL_L10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8G067-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDRAEKREFV AWLNGAFKES GSVVVAHYTG LTVAQMSDLR SKMRDAGGSV
60 70 80 90 100
KVAKNRLAKI ALQGTESEGI ADLFTGQTVV AYANDPITAP KVAVEFAKAN
110 120 130 140 150
DKLVILGGAM GATTLNADGV KSLASLPSLD ELRAKLVGMI QTPAQRLAVL
160 170
TSAPASQIAR VIGAHARKNE AA
Length:172
Mass (Da):17,975
Last modified:March 1, 2003 - v1
Checksum:iC5954CB3ACF81E6B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN30165.1.
CP002997 Genomic DNA. Translation: AEM18583.1.
RefSeqiNP_698250.1. NC_004310.3.
WP_006190506.1. NZ_KN046804.1.
YP_005616075.1. NC_017251.1.

Genome annotation databases

EnsemblBacteriaiAAN30165; AAN30165; BR1246.
AEM18583; AEM18583; BS1330_I1242.
KEGGibms:BR1246.
bsi:BS1330_I1242.
PATRICi17790827. VBIBruSui107850_1267.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014291 Genomic DNA. Translation: AAN30165.1.
CP002997 Genomic DNA. Translation: AEM18583.1.
RefSeqiNP_698250.1. NC_004310.3.
WP_006190506.1. NZ_KN046804.1.
YP_005616075.1. NC_017251.1.

3D structure databases

ProteinModelPortaliQ8G067.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN30165; AAN30165; BR1246.
AEM18583; AEM18583; BS1330_I1242.
KEGGibms:BR1246.
bsi:BS1330_I1242.
PATRICi17790827. VBIBruSui107850_1267.

Phylogenomic databases

eggNOGiCOG0244.
HOGENOMiHOG000004852.
KOiK02864.
OMAiGVYIRVV.
OrthoDBiEOG6DNTDR.

Family and domain databases

HAMAPiMF_00362. Ribosomal_L10.
InterProiIPR022973. Ribosomal_L10.
IPR002363. Ribosomal_L10_eubac_CS.
IPR001790. Ribosomal_L10P.
[Graphical view]
PfamiPF00466. Ribosomal_L10. 1 hit.
[Graphical view]
PROSITEiPS01109. RIBOSOMAL_L10. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1330.

Entry informationi

Entry nameiRL10_BRUSU
AccessioniPrimary (citable) accession number: Q8G067
Secondary accession number(s): G0KAG7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 25, 2003
Last sequence update: March 1, 2003
Last modified: June 24, 2015
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella suis
    Brucella suis (strain 1330): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.