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Protein
Submitted name:

DNA polymerase III delta' subunit

Gene
N/A
Organism
Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. 3'-5' exonuclease activity Source: InterPro
  2. DNA-directed DNA polymerase activity Source: InterPro

GO - Biological processi

  1. DNA replication Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCEFF196164:GJW8-321-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase III delta' subunitImported
OrganismiCorynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)Imported
Taxonomic identifieri196164 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium
ProteomesiUP000001409 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi196164.CE0311.

Structurei

3D structure databases

ProteinModelPortaliQ8FSS1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000192594.
KOiK02341.
OMAiHSWLFTG.
OrthoDBiEOG6MSS4P.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR004622. DNA_pol_HolB.
IPR027417. P-loop_NTPase.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00678. holB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8FSS1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNSRVFDNL ASPPAVVQTL IDAATTARQI ARDGGAGAGA GDAGTARDST
60 70 80 90 100
FTHSWLFTGP PGSGRSVAAR AFAAALVCSD PDEVGCGRCE HCRATLADTH
110 120 130 140 150
GDVVFIQPHE LSIGIDLMRT VVDDAARLPT VSNWRVIILE NADRLTEPAG
160 170 180 190 200
NALLKTVEEP PERTIIILCA PSTDPEDIMV TLRSRCRHVY IPTPTIEQVT
210 220 230 240 250
RILVSEGGVA EDDARLAAAS SGGHIGRARH LVHNQKVQVR RANILNLSEL
260 270 280 290 300
IFHGDQAFQA VNSLIKGIEK EMVETLEPLE EQEREKLETS LGMGSRGKGV
310 320 330 340 350
HKALQGTGGQ LKALEDNQKK RRTRFLRDAL DLALIDLAGI YRDALVVASG
360 370 380 390 400
AEVGLTHPDM EGLSTELATK VTPEGLLDCL DAINKSREYF GQNVRPVVAM
410
DALVGRLRKA YKVR
Length:414
Mass (Da):44,624
Last modified:March 1, 2003 - v1
Checksum:i8263018172390BF7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000035 Genomic DNA. Translation: BAC17121.1.
RefSeqiNP_736921.1. NC_004369.1.

Genome annotation databases

EnsemblBacteriaiBAC17121; BAC17121; BAC17121.
KEGGicef:CE0311.
PATRICi21486812. VBICorEff9312_0353.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000035 Genomic DNA. Translation: BAC17121.1.
RefSeqiNP_736921.1. NC_004369.1.

3D structure databases

ProteinModelPortaliQ8FSS1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi196164.CE0311.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC17121; BAC17121; BAC17121.
KEGGicef:CE0311.
PATRICi21486812. VBICorEff9312_0353.

Phylogenomic databases

HOGENOMiHOG000192594.
KOiK02341.
OMAiHSWLFTG.
OrthoDBiEOG6MSS4P.

Enzyme and pathway databases

BioCyciCEFF196164:GJW8-321-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR004622. DNA_pol_HolB.
IPR027417. P-loop_NTPase.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00678. holB. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens."
    Nishio Y., Nakamura Y., Kawarabayasi Y., Usuda Y., Kimura E., Sugimoto S., Matsui K., Yamagishi A., Kikuchi H., Ikeo K., Gojobori T.
    Genome Res. 13:1572-1579(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395Imported.

Entry informationi

Entry nameiQ8FSS1_COREF
AccessioniPrimary (citable) accession number: Q8FSS1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: April 1, 2015
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.