Q8FQP2 (Q8FQP2_COREF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Exodeoxyribonuclease 7 small subunit HAMAP-Rule MF_00337
EC=3.1.11.6 HAMAP-Rule MF_00337

Alternative name(s):
Exodeoxyribonuclease VII small subunit HAMAP-Rule MF_00337

Gene names

Name:	xseB HAMAP-Rule MF_00337 EMBL EEW49972.1
ORF Names:	HMPREF0290_1386 EMBL EEW49972.1

Organism

Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) [Complete proteome] [HAMAP] EMBL BAC17887.1

Taxonomic identifier

196164 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium › Corynebacterium efficiens

Protein attributes

Sequence length	82 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides By similarity. SAAS SAAS003761 HAMAP-Rule MF_00337
Catalytic activity	Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates. HAMAP-Rule MF_00337 Exonucleolytic cleavage in either 5'- to 3'-or 3'- to 5'-direction to yield nucleoside 5'-phosphates. SAAS SAAS003761
Subunit structure	Heterooligomer composed of large and small subunits By similarity. SAAS SAAS003761 HAMAP-Rule MF_00337
Subcellular location	Cytoplasm By similarity SAAS SAAS003761 HAMAP-Rule MF_00337.
Sequence similarities	Belongs to the XseB family. HAMAP-Rule MF_00337

Ontologies

Keywords
Cellular component	Cytoplasm SAAS SAAS003761 HAMAP-Rule MF_00337
Molecular function	Exonuclease SAAS SAAS003761 HAMAP-Rule MF_00337 EMBL EEW49972.1 Hydrolase Nuclease
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA catabolic process Inferred from electronic annotation. Source: HAMAP nucleic acid phosphodiester bond hydrolysis Inferred from electronic annotation. Source: GOC
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell exodeoxyribonuclease VII complex Inferred from electronic annotation. Source: InterPro
Molecular_function	exodeoxyribonuclease VII activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8FQP2 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: 3ADC72B9DDB93A8E	FASTA	82	9,138
	10 20 30 40 50 60 MTNPDVIGSG AGNYEFEPVE SLSYEQARDE LVEIVKILEL GQMGLDESLR YWERGESLAR 70 80 RCEEHLAGAS KRVEQALGNQ PA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens." Nishio Y., Nakamura Y., Kawarabayasi Y., Usuda Y., Kimura E., Sugimoto S., Matsui K., Yamagishi A., Kikuchi H., Ikeo K., Gojobori T. Genome Res. 13:1572-1579(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395 and YS-314 EMBL BAC17887.1.
[2]	Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., Zhang L., Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., Korchina V., Kovar C., Mata R., Mathew T., Ngo R. , Nguyen L., Nguyen N., Okwuonu G., Ongeri F., Pham C., Simmons D., Wilczek-Boney K., Hale W., Jakkamsetti A., Pham P., Ruth R., San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C., Zhu D., Lee S., Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S., Hirani K., Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S., Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L., Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P., Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K., Petrosino J., Highlander S., Gibbs R. Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: YS-314 EMBL EEW49972.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000035 Genomic DNA. Translation: BAC17887.1. ACLI01000072 Genomic DNA. Translation: EEW49972.1.
RefSeq	NP_737687.1. NC_004369.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	196164.CE1077.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAC17887; BAC17887; BAC17887.
GeneID	1033258.
KEGG	cef:CE1077.
PATRIC	21488292. VBICorEff9312_1080.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1722.
HOGENOM	HOG000228798.
KO	K03602.
OMA	EPELSYE.
ProtClustDB	PRK00977.
Enzyme and pathway databases
BioCyc	CEFF196164:GJW8-1096-MONOMER.
Family and domain databases
Gene3D	1.10.287.1040. 1 hit.
HAMAP	MF_00337. Exonuc_7_S.
InterPro	IPR003761. Exonuc_VII_S. [Graphical view]
Pfam	PF02609. Exonuc_VII_S. 1 hit. [Graphical view]
PIRSF	PIRSF006488. Exonuc_VII_S. 1 hit.
ProDom	PD028235. Exonuc_VII_S. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF116842. SSF116842. 1 hit.
TIGRFAMs	TIGR01280. xseB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8FQP2_COREF

Accession

Primary (citable) accession number: Q8FQP2
Secondary accession number(s): C8NN11

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	March 1, 2003
Last modified:	May 1, 2013
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)