Q8FQ74 (Q8FQ74_COREF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent RNA helicase DeaD EMBL EEW50736.1
EC=3.6.1.- EMBL EEW50736.1

Submitted name:
Putative cold shock DEAD-box protein A EMBL BAC18069.1

Gene names

Name:	deaD EMBL EEW50736.1
ORF Names:	HMPREF0290_0627 EMBL EEW50736.1

Organism

Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) [Complete proteome] [HAMAP] EMBL BAC18069.1

Taxonomic identifier

196164 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium › Corynebacterium efficiens

Protein attributes

Sequence length	736 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the DEAD box helicase family. RuleBase RU000492

Ontologies

Keywords
Ligand	ATP-binding Nucleotide-binding
Molecular function	Helicase RuleBase RU000492 EMBL EEW50736.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent helicase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8FQ74 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: 8FFAEF8C99E3BA6F	FASTA	736	80,505
	10 20 30 40 50 60 MRNTDNVNGD VEQPDNVISS ESQETPQGDS AAADFALDTP TNTVEGTAVS EGSEEITRVA 70 80 90 100 110 120 EISEDADSAE AADSASNVIN ENVNEDSSED VTQSSHESSS TEASTGFDAL GLPQQVLDAV 130 140 150 160 170 180 RKVGFETPSP IQAQTIPVLM DGHDVVGLAQ TGTGKTAAFA LPVLSRIDKS VRSPQALVLA 190 200 210 220 230 240 PTRELALQVA DSFQSFADHL GGLNVLPIYG GQAYGIQLSG LRRGAHIVVG TPGRIIDHLE 250 260 270 280 290 300 KGSLDISGLR FLVLDEADEM LNMGFQEDVE RILADTPDDK QVALFSATMP NGIRRLSKQY 310 320 330 340 350 360 LNNPQEISVK SETRTATNIT QRFLSVAHRN KMDALTRILE VTEFEAMIMF VRTKHETEEV 370 380 390 400 410 420 AEKLRARGFS AAAINGDIAQ AQRERTVDQL KDGRLDILVA TDVAARGLDV ERISHVLNYD 430 440 450 460 470 480 IPNDTESYVH RIGRTGRAGR TGEAILFVTP RERRMLRSIE RATNAPLVEM ELPTVDEVNE 490 500 510 520 530 540 YRKVKFADSI TEALENPQVA LFRTLIKEYA EKNDVPLEDV AAALATQAQA GNDFFLTEQA 550 560 570 580 590 600 ADRDRGRGDR RRDRDFDDRG GRGRDRGDRP SRFDRDDANL ATYRIAVGKR QHVRPGAIVG 610 620 630 640 650 660 ALANEGGLNS KDFGRITIAA DHTLVELPKD LPQSVLDNLR DTRISGQLIN IERDSGGRPP 670 680 690 700 710 720 RRFERDDRGG DRGGRGGFRG DRDDRGGRGG FRGGRDRDDR GGRGGFRGDR DDRGGRGGFR 730 GGRDRDDRGG RGGWRD

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens." Nishio Y., Nakamura Y., Kawarabayasi Y., Usuda Y., Kimura E., Sugimoto S., Matsui K., Yamagishi A., Kikuchi H., Ikeo K., Gojobori T. Genome Res. 13:1572-1579(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395 and YS-314 EMBL BAC18069.1.
[2]	Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., Zhang L., Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., Korchina V., Kovar C., Mata R., Mathew T., Ngo R. , Nguyen L., Nguyen N., Okwuonu G., Ongeri F., Pham C., Simmons D., Wilczek-Boney K., Hale W., Jakkamsetti A., Pham P., Ruth R., San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C., Zhu D., Lee S., Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S., Hirani K., Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S., Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L., Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P., Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K., Petrosino J., Highlander S., Gibbs R. Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: YS-314 EMBL EEW50736.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000035 Genomic DNA. Translation: BAC18069.1. ACLI01000041 Genomic DNA. Translation: EEW50736.1.
RefSeq	NP_737869.1. NC_004369.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	196164.CE1259.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAC18069; BAC18069; BAC18069.
GeneID	1033494.
KEGG	cef:CE1259.
PATRIC	21488648. VBICorEff9312_1258.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0513.
HOGENOM	HOG000268810.
KO	K05592.
OMA	LPQGMPK.
ProtClustDB	CLSK633244.
Family and domain databases
InterPro	IPR005580. DbpA_RNA-bd. IPR011545. DNA/RNA_helicase_DEAD/DEAH_N. IPR014001. Helicase_ATP-bd. IPR001650. Helicase_C. IPR027417. P-loop_NTPase. IPR000629. RNA-helicase_DEAD-box_CS. IPR014014. RNA_helicase_DEAD_Q_motif. [Graphical view]
Pfam	PF03880. DbpA. 1 hit. PF00270. DEAD. 1 hit. PF00271. Helicase_C. 1 hit. [Graphical view]
SMART	SM00487. DEXDc. 1 hit. SM00490. HELICc. 1 hit. [Graphical view]
SUPFAM	SSF52540. SSF52540. 1 hit.
PROSITE	PS00039. DEAD_ATP_HELICASE. 1 hit. PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. PS51195. Q_MOTIF. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8FQ74_COREF

Accession

Primary (citable) accession number: Q8FQ74
Secondary accession number(s): C8NKV2

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	March 1, 2003
Last modified:	May 29, 2013
This is version 80 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)