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Protein
Submitted name:

Putative protocatechuate 3,4-dioxygenase alpha chain

Gene
N/A
Organism
Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DioxygenaseImported, Oxidoreductase

Names & Taxonomyi

Protein namesi
Submitted name:
Putative protocatechuate 3,4-dioxygenase alpha chainImported
OrganismiCorynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)Imported
Taxonomic identifieri196164 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesCorynebacteriaceaeCorynebacterium
ProteomesiUP000001409 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi196164.HMPREF0290_2338.

Structurei

3D structure databases

ProteinModelPortaliQ8FN48.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000174838.
KOiK00448.
OMAiRFETIKP.
OrthoDBiEOG60PHG0.

Family and domain databases

Gene3Di2.60.130.10. 1 hit.
InterProiIPR000627. Intradiol_dOase_C.
IPR015889. Intradiol_dOase_core.
IPR012786. Protocat_dOase_a.
[Graphical view]
PfamiPF00775. Dioxygenase_C. 1 hit.
[Graphical view]
SUPFAMiSSF49482. SSF49482. 1 hit.
TIGRFAMsiTIGR02423. protocat_alph. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8FN48-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIDTGKNGEF RYEQSTITDQ DEAEFGITPS QTVGPYVHIG LSLEDSHLMV
60 70 80 90 100
EPGTEGAIEL EITVVDGNGD PIADAMFEIW QAGPDGVHNS DLDPNRTTPA
110 120 130 140 150
TVDGFRGLGR AMADANGAAT FTTLTPGAVG DEAPHFKVGV FARGMLERLY
160 170 180 190 200
TRAYLPDADL SADPVLSAVP DDRRDLLVAT ATDNGYRFDI TVQSEQGETP

FFAL
Length:204
Mass (Da):21,867
Last modified:March 1, 2003 - v1
Checksum:iE9630B21F22B4C55
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000035 Genomic DNA. Translation: BAC19110.1.
RefSeqiWP_006768304.1. NZ_GG700683.1.

Genome annotation databases

EnsemblBacteriaiBAC19110; BAC19110; BAC19110.
EEW48967; EEW48967; HMPREF0290_2338.
KEGGicef:CE2300.
PATRICi21490725. VBICorEff9312_2274.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000035 Genomic DNA. Translation: BAC19110.1.
RefSeqiWP_006768304.1. NZ_GG700683.1.

3D structure databases

ProteinModelPortaliQ8FN48.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi196164.HMPREF0290_2338.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC19110; BAC19110; BAC19110.
EEW48967; EEW48967; HMPREF0290_2338.
KEGGicef:CE2300.
PATRICi21490725. VBICorEff9312_2274.

Phylogenomic databases

HOGENOMiHOG000174838.
KOiK00448.
OMAiRFETIKP.
OrthoDBiEOG60PHG0.

Family and domain databases

Gene3Di2.60.130.10. 1 hit.
InterProiIPR000627. Intradiol_dOase_C.
IPR015889. Intradiol_dOase_core.
IPR012786. Protocat_dOase_a.
[Graphical view]
PfamiPF00775. Dioxygenase_C. 1 hit.
[Graphical view]
SUPFAMiSSF49482. SSF49482. 1 hit.
TIGRFAMsiTIGR02423. protocat_alph. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens."
    Nishio Y., Nakamura Y., Kawarabayasi Y., Usuda Y., Kimura E., Sugimoto S., Matsui K., Yamagishi A., Kikuchi H., Ikeo K., Gojobori T.
    Genome Res. 13:1572-1579(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395Imported.

Entry informationi

Entry nameiQ8FN48_COREF
AccessioniPrimary (citable) accession number: Q8FN48
Secondary accession number(s): C8NQR3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 22, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.