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Q8FEF3 (Q8FEF3_ECOL6) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.3.1.17 EMBL AAN81812.1
Gene names
Name:sdaB EMBL AAN81812.1
Ordered Locus Names:c3365
OrganismEscherichia coli O6 [Complete proteome] [HAMAP]
Taxonomic identifier217992 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length455 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL AAN81812.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processgluconeogenesis

Inferred from electronic annotation. Source: InterPro

   Molecular function4 iron, 4 sulfur cluster binding

Inferred from electronic annotation. Source: InterPro

L-serine ammonia-lyase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8FEF3 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 4B38DB013996FDC8

FASTA45548,723
        10         20         30         40         50         60 
MISVFDIFKI GIGPSSSHTV GPMKAGKQFT DDLIARNLLK DVTRVVVDVY GSLSLTGKGH 

        70         80         90        100        110        120 
HTDIAIIMGL AGNLPDTVDI DSIPGFIQDV NTHGRLMLAN GQHEVEFPVD QCMNFHADNL 

       130        140        150        160        170        180 
SLHENGMRIT ALAGDKVVYS QTYYSIGGGF IVDEEHFGQQ DSAPVEVPYP YSSAADLQKH 

       190        200        210        220        230        240 
CQETGLSLSG LMMKNELALH SKEELEQHLA NVWEVMRGGI ERGISTEGVL PGKLRVPRRA 

       250        260        270        280        290        300 
AALRRMLVSQ DKTTTDPMAV VDWINMFALA VNEENAAGGR VVTAPTNGAC GIIPAVLAYY 

       310        320        330        340        350        360 
DKFIREVNAN SLARYLLVAS AIGSLYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGA 

       370        380        390        400        410        420 
SPAQVCIAAE IAMEHNLGLT CDPVAGQVQV PCIERNAIAA VKAVNAARMA LRRTSEPRVC 

       430        440        450 
LDKVIETMYE TGKDMNAKYR ETSRGGLAMK IVACD 

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References

[1]"Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli."
Welch R.A., Burland V., Plunkett G. 3rd, Redford P., Roesch P., Rasko D., Buckles E.L., Liou S.R., Boutin A., Hackett J., Stroud D., Mayhew G.F., Rose D.J., Zhou S., Schwartz D.C., Perna N.T., Mobley H.L., Donnenberg M.S., Blattner F.R.
Proc. Natl. Acad. Sci. U.S.A. 99:17020-17024(2002) [PubMed: 12471157] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: O6:H1 / CFT073 / ATCC 700928 / UPEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE014075 Genomic DNA. Translation: AAN81812.1.
RefSeqNP_755242.1. NC_004431.1.

3D structure databases

ProteinModelPortalQ8FEF3.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000044182; EBESCP00000042531; EBESCG00000043232.
GeneID1039211.
GenomeReviewsGene locus c3365 in contig AE014075_GR.
KEGGecc:c3365.
PATRIC18284558. VBIEscCol75197_3168.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000009684.
HOGENOMHBG304565.
OMAENGMRIS.
ProtClustDBCLSK880494.

Family and domain databases

InterProIPR004644. Fe-S_L-Ser_mono.
IPR005130. Ser_deHydtase-like_asu.
IPR005131. Ser_deHydtase_bsu.
[Graphical view]
KOK01752.
PfamPF03313. SDH_alpha. 1 hit.
PF03315. SDH_beta. 1 hit.
[Graphical view]
TIGRFAMsTIGR00720. Sda_mono. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ8FEF3_ECOL6
AccessionPrimary (citable) accession number: Q8FEF3
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)