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Protein

HTH-type transcriptional regulator YidZ

Gene

yidZ

Organism
Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Involved in anaerobic NO protection.UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi25 – 44H-T-H motifUniRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator YidZUniRule annotation
Gene namesi
Name:yidZUniRule annotation
Ordered Locus Names:c4634
OrganismiEscherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Taxonomic identifieri199310 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000001410 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001058031 – 319HTH-type transcriptional regulator YidZAdd BLAST319

Interactioni

Protein-protein interaction databases

STRINGi199310.c4634

Structurei

3D structure databases

ProteinModelPortaliQ8FBU9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 65HTH lysR-typeUniRule annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG4105G2Y Bacteria
ENOG410XRYC LUCA
HOGENOMiHOG000103694
OMAiYRYRSVS

Family and domain databases

CDDicd08417 PBP2_Nitroaromatics_like, 1 hit
Gene3Di1.10.10.10, 1 hit
HAMAPiMF_01607 HTH_type_YidZ, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR023746 Tscrpt_reg_YidZ
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
IPR037402 YidZ_PBP2
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

Q8FBU9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKSITTLDL NLLLCLQLLM QERSVTKAAK RMNVTPSAVS KSLAKLRAWF
60 70 80 90 100
DDPLFVNSPL GLSPTPLMVS MEQNLAEWMQ MSNLLLDKPH HQTPRGLKFE
110 120 130 140 150
LAAESPLMMI MLNALSKRIY QRYPQATIKL RNWDYDSLDA ITRGEVDIGF
160 170 180 190 200
SGRESHPRSR ELLSSLPLAI DYEVLFSDVP CVWLRKDHPA LHEAWNLDTF
210 220 230 240 250
LRYPHISICW EQSDTWALDN VLQELGRERT IAMSLPEFEQ SLFMAAQPDN
260 270 280 290 300
LLLATAPRYC QYYNQLHQLP LVALPLPFDE SQQKKLEVPF TLLWHKRNSR
310
NPKIVWLRET IKNLYASMA
Length:319
Mass (Da):36,918
Last modified:March 15, 2005 - v2
Checksum:i96E28F19C7556DAE
GO

Sequence cautioni

The sequence AAN83066 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014075 Genomic DNA Translation: AAN83066.1 Different initiation.
RefSeqiWP_000748500.1, NC_004431.1

Genome annotation databases

EnsemblBacteriaiAAN83066; AAN83066; c4634
KEGGiecc:c4634

Similar proteinsi

Entry informationi

Entry nameiYIDZ_ECOL6
AccessioniPrimary (citable) accession number: Q8FBU9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: March 15, 2005
Last modified: April 25, 2018
This is version 90 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

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