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Q8FB87 (Q8FB87_ECOL6) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:birA EMBL AAN83360.1
Ordered Locus Names:c4932 EMBL AAN83360.1
OrganismEscherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) [Complete proteome] [HAMAP] EMBL AAN83360.1
Taxonomic identifier199310 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length321 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q8FB87 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: B4CAB93D827BF0D0

FASTA32135,426
        10         20         30         40         50         60 
MKDNTVPLKL IALLANGEFH SGEQLGETLG MSRAAINKHI QTLRDWGVDV FTVPGKGYSL 

        70         80         90        100        110        120 
PEPIQLLNAE KILSQLDDGS VAVLPVIDST NQYLLDRIGE LKSGDACVAE YQHAGRGRRG 

       130        140        150        160        170        180 
RKWFSPFGAN LYLSMFWRLE QGPAAAIGLS LVIGIVMAEV LRKLGADKVR VKWPNDLYLQ 

       190        200        210        220        230        240 
DRKLAGILVE LTGKTGDAAQ IVIGAGINMA MRRVEESVVN QGWITLQEAG INLDRNTLAA 

       250        260        270        280        290        300 
MLIRELRAAL ELFEQEGLTP YLSRWEKLDN FINRPVKLII GDKEIFGISR GIDKQGALLL 

       310        320 
EQDGIIKPWM GGEISLRSAE K 

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References

[1]"Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli."
Welch R.A., Burland V., Plunkett G.III., Redford P., Roesch P., Rasko D., Buckles E.L., Liou S.R., Boutin A., Hackett J., Stroud D., Mayhew G.F., Rose D.J., Zhou S., Schwartz D.C., Perna N.T., Mobley H.L., Donnenberg M.S., Blattner F.R.
Proc. Natl. Acad. Sci. U.S.A. 99:17020-17024(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CFT073 / ATCC 700928 / UPEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE014075 Genomic DNA. Translation: AAN83360.1.
RefSeqNP_756786.1. NC_004431.1.

3D structure databases

ProteinModelPortalQ8FB87.
SMRQ8FB87. Positions 3-320.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING199310.c4932.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAN83360; AAN83360; c4932.
GeneID1039892.
KEGGecc:c4932.
PATRIC18287556. VBIEscCol75197_4632.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000041812.
KOK03524.
OMAVWKHIEE.
OrthoDBEOG6DNTBX.
ProtClustDBPRK11886.

Enzyme and pathway databases

BioCycECOL199310:C4932-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR004408. Biotin_CoA_COase_ligase.
IPR004409. Biotin_operon_repress_HTH.
IPR003142. BPL_C.
IPR004143. BPL_LipA_LipB.
IPR013196. HTH_11.
IPR008988. Transcriptional_repressor_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERPTHR12835. PTHR12835. 1 hit.
PfamPF02237. BPL_C. 1 hit.
PF03099. BPL_LplA_LipB. 1 hit.
PF08279. HTH_11. 1 hit.
[Graphical view]
SUPFAMSSF50037. SSF50037. 1 hit.
TIGRFAMsTIGR00121. birA_ligase. 1 hit.
TIGR00122. birA_repr_reg. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ8FB87_ECOL6
AccessionPrimary (citable) accession number: Q8FB87
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: April 16, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)