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Q8EKK0

- DEOD1_SHEON

UniProt

Q8EKK0 - DEOD1_SHEON

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Protein

Purine nucleoside phosphorylase DeoD-type 1

Gene
deoD1, SO_0092
Organism
Shewanella oneidensis (strain MR-1)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. purine nucleoside metabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-type 1 (EC:2.4.2.1)
Short name:
PNP 1
Gene namesi
Name:deoD1
Ordered Locus Names:SO_0092
OrganismiShewanella oneidensis (strain MR-1)
Taxonomic identifieri211586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000008186: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 236236Purine nucleoside phosphorylase DeoD-type 1UniRule annotationPRO_0000063159Add
BLAST

Interactioni

Subunit structurei

Homohexamer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi211586.SO_0092.

Structurei

3D structure databases

ProteinModelPortaliQ8EKK0.
SMRiQ8EKK0. Positions 2-235.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0813.
HOGENOMiHOG000274896.
KOiK03784.
OMAiFHELMAT.
OrthoDBiEOG6BKJC5.
PhylomeDBiQ8EKK0.

Family and domain databases

Gene3Di3.40.50.1580. 1 hit.
HAMAPiMF_01627. Pur_nucleosid_phosp.
InterProiIPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view]
PANTHERiPTHR21234. PTHR21234. 1 hit.
PfamiPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMiSSF53167. SSF53167. 1 hit.
TIGRFAMsiTIGR00107. deoD. 1 hit.
PROSITEiPS01232. PNP_UDP_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8EKK0-1 [UniParc]FASTAAdd to Basket

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MSTPHINANP GDFAKTIIMS GDPLRAKLIA ETYLEDVKEV TNVRGILGFT    50
GKYKSKDISI MGHGMGAPSA SIYFHELMAT YGVKNFIRVG SCGAISDNIH 100
LKDLIVAMGA STDSKINRIR FLDHDLAAIA NYDLLQACIE VLKTTTVNYK 150
VGNVFSSDLF YRPNENDYTL MAKYGVLGVE MEVNALYALA AEHQCRALAL 200
CTVTDHIVQH EHLTADERRT DLHEMVKVAL ETAIKI 236
Length:236
Mass (Da):26,038
Last modified:March 1, 2003 - v1
Checksum:i0C13CC7DD7F453E3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE014299 Genomic DNA. Translation: AAN53179.1.
RefSeqiNP_715734.1. NC_004347.2.

Genome annotation databases

EnsemblBacteriaiAAN53179; AAN53179; SO_0092.
GeneIDi1167990.
KEGGison:SO_0092.
PATRICi23519885. VBISheOne101494_0093.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE014299 Genomic DNA. Translation: AAN53179.1 .
RefSeqi NP_715734.1. NC_004347.2.

3D structure databases

ProteinModelPortali Q8EKK0.
SMRi Q8EKK0. Positions 2-235.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 211586.SO_0092.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAN53179 ; AAN53179 ; SO_0092 .
GeneIDi 1167990.
KEGGi son:SO_0092.
PATRICi 23519885. VBISheOne101494_0093.

Phylogenomic databases

eggNOGi COG0813.
HOGENOMi HOG000274896.
KOi K03784.
OMAi FHELMAT.
OrthoDBi EOG6BKJC5.
PhylomeDBi Q8EKK0.

Family and domain databases

Gene3Di 3.40.50.1580. 1 hit.
HAMAPi MF_01627. Pur_nucleosid_phosp.
InterProi IPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view ]
PANTHERi PTHR21234. PTHR21234. 1 hit.
Pfami PF01048. PNP_UDP_1. 1 hit.
[Graphical view ]
SUPFAMi SSF53167. SSF53167. 1 hit.
TIGRFAMsi TIGR00107. deoD. 1 hit.
PROSITEi PS01232. PNP_UDP_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MR-1.

Entry informationi

Entry nameiDEOD1_SHEON
AccessioniPrimary (citable) accession number: Q8EKK0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 10, 2006
Last sequence update: March 1, 2003
Last modified: July 9, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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