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Q8EKK0

- DEOD1_SHEON

UniProt

Q8EKK0 - DEOD1_SHEON

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Protein

Purine nucleoside phosphorylase DeoD-type 1

Gene

deoD1

Organism
Shewanella oneidensis (strain MR-1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. purine nucleoside metabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-type 1UniRule annotation (EC:2.4.2.1UniRule annotation)
Short name:
PNP 1UniRule annotation
Gene namesi
Name:deoD1UniRule annotation
Ordered Locus Names:SO_0092
OrganismiShewanella oneidensis (strain MR-1)
Taxonomic identifieri211586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000008186: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 236236Purine nucleoside phosphorylase DeoD-type 1PRO_0000063159Add
BLAST

Interactioni

Subunit structurei

Homohexamer.UniRule annotation

Protein-protein interaction databases

STRINGi211586.SO_0092.

Structurei

3D structure databases

ProteinModelPortaliQ8EKK0.
SMRiQ8EKK0. Positions 2-235.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PNP/UDP phosphorylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0813.
HOGENOMiHOG000274896.
KOiK03784.
OMAiFHELMAT.
OrthoDBiEOG6BKJC5.
PhylomeDBiQ8EKK0.

Family and domain databases

Gene3Di3.40.50.1580. 1 hit.
HAMAPiMF_01627. Pur_nucleosid_phosp.
InterProiIPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view]
PANTHERiPTHR21234. PTHR21234. 1 hit.
PfamiPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMiSSF53167. SSF53167. 1 hit.
TIGRFAMsiTIGR00107. deoD. 1 hit.
PROSITEiPS01232. PNP_UDP_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8EKK0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSTPHINANP GDFAKTIIMS GDPLRAKLIA ETYLEDVKEV TNVRGILGFT
60 70 80 90 100
GKYKSKDISI MGHGMGAPSA SIYFHELMAT YGVKNFIRVG SCGAISDNIH
110 120 130 140 150
LKDLIVAMGA STDSKINRIR FLDHDLAAIA NYDLLQACIE VLKTTTVNYK
160 170 180 190 200
VGNVFSSDLF YRPNENDYTL MAKYGVLGVE MEVNALYALA AEHQCRALAL
210 220 230
CTVTDHIVQH EHLTADERRT DLHEMVKVAL ETAIKI
Length:236
Mass (Da):26,038
Last modified:March 1, 2003 - v1
Checksum:i0C13CC7DD7F453E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN53179.1.
RefSeqiNP_715734.1. NC_004347.2.
WP_011070503.1. NC_004347.2.

Genome annotation databases

EnsemblBacteriaiAAN53179; AAN53179; SO_0092.
GeneIDi1167990.
KEGGison:SO_0092.
PATRICi23519885. VBISheOne101494_0093.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN53179.1 .
RefSeqi NP_715734.1. NC_004347.2.
WP_011070503.1. NC_004347.2.

3D structure databases

ProteinModelPortali Q8EKK0.
SMRi Q8EKK0. Positions 2-235.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 211586.SO_0092.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAN53179 ; AAN53179 ; SO_0092 .
GeneIDi 1167990.
KEGGi son:SO_0092.
PATRICi 23519885. VBISheOne101494_0093.

Phylogenomic databases

eggNOGi COG0813.
HOGENOMi HOG000274896.
KOi K03784.
OMAi FHELMAT.
OrthoDBi EOG6BKJC5.
PhylomeDBi Q8EKK0.

Family and domain databases

Gene3Di 3.40.50.1580. 1 hit.
HAMAPi MF_01627. Pur_nucleosid_phosp.
InterProi IPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view ]
PANTHERi PTHR21234. PTHR21234. 1 hit.
Pfami PF01048. PNP_UDP_1. 1 hit.
[Graphical view ]
SUPFAMi SSF53167. SSF53167. 1 hit.
TIGRFAMsi TIGR00107. deoD. 1 hit.
PROSITEi PS01232. PNP_UDP_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MR-1.

Entry informationi

Entry nameiDEOD1_SHEON
AccessioniPrimary (citable) accession number: Q8EKK0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 10, 2006
Last sequence update: March 1, 2003
Last modified: November 26, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3