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Protein

Putative agmatine deiminase

Gene

aguA

Organism
Shewanella oneidensis (strain MR-1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Agmatine + H2O = N-carbamoylputrescine + NH3.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei361 – 3611Amidino-cysteine intermediateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Names & Taxonomyi

Protein namesi
Recommended name:
Putative agmatine deiminaseUniRule annotation (EC:3.5.3.12UniRule annotation)
Alternative name(s):
Agmatine iminohydrolaseUniRule annotation
Gene namesi
Name:aguAUniRule annotation
Ordered Locus Names:SO_0887
OrganismiShewanella oneidensis (strain MR-1)
Taxonomic identifieri211586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000008186 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 370370Putative agmatine deiminasePRO_0000194341Add
BLAST

Proteomic databases

PaxDbiQ8EIF2.

Interactioni

Protein-protein interaction databases

STRINGi211586.SO_0887.

Structurei

3D structure databases

ProteinModelPortaliQ8EIF2.
SMRiQ8EIF2. Positions 14-369.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the agmatine deiminase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DWY. Bacteria.
COG2957. LUCA.
HOGENOMiHOG000239346.
KOiK10536.
OMAiEVLLAWT.
OrthoDBiEOG6M3PB5.
PhylomeDBiQ8EIF2.

Family and domain databases

HAMAPiMF_01841. Agmatine_deimin.
InterProiIPR017754. Agmatine_deiminase.
IPR007466. Peptidyl-Arg-deiminase_porph.
[Graphical view]
PfamiPF04371. PAD_porph. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03380. agmatine_aguA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8EIF2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNVNVDVTP LTTKPSQDGF YMPAEWAAQQ AVWMIWPYRP DNWRAAGAYA
60 70 80 90 100
QATFAKVVDA IGAATPVYMG VPKAFLAKAK TVMPSHVTLV EMDSNDCWAR
110 120 130 140 150
DTGPTVVVNA EGECRGVDWG FNAWGGHNGG LYFPWDKDEQ VAQQMLAQHG
160 170 180 190 200
FARYRAPLIL EGGSIHVDGE GTCMTSAECL LNANRNPELT KEQIEGLLRD
210 220 230 240 250
YLNVKQFIWL QDGVYMDETD GHIDNMCCFA RPGEVILHWT DDESDPQYPR
260 270 280 290 300
SKAALEVLQN TVDAQGRKLK IHLLPQPGPL YCSEEESKGV TEGTGVPRTA
310 320 330 340 350
GERLAGSYVN FLITNHRIVF PLLDPATDDI AAQKLQEIFP EHEIVGVPAR
360 370
EILLGGGNIH CITQQIPAGK
Length:370
Mass (Da):40,794
Last modified:August 16, 2005 - v2
Checksum:iCCDB60F8E2FE34A9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN53963.2.
RefSeqiNP_716518.2. NC_004347.2.
WP_011071176.1. NC_004347.2.

Genome annotation databases

EnsemblBacteriaiAAN53963; AAN53963; SO_0887.
GeneIDi1168734.
KEGGison:SO_0887.
PATRICi23521437. VBISheOne101494_0852.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN53963.2.
RefSeqiNP_716518.2. NC_004347.2.
WP_011071176.1. NC_004347.2.

3D structure databases

ProteinModelPortaliQ8EIF2.
SMRiQ8EIF2. Positions 14-369.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi211586.SO_0887.

Proteomic databases

PaxDbiQ8EIF2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN53963; AAN53963; SO_0887.
GeneIDi1168734.
KEGGison:SO_0887.
PATRICi23521437. VBISheOne101494_0852.

Phylogenomic databases

eggNOGiENOG4105DWY. Bacteria.
COG2957. LUCA.
HOGENOMiHOG000239346.
KOiK10536.
OMAiEVLLAWT.
OrthoDBiEOG6M3PB5.
PhylomeDBiQ8EIF2.

Family and domain databases

HAMAPiMF_01841. Agmatine_deimin.
InterProiIPR017754. Agmatine_deiminase.
IPR007466. Peptidyl-Arg-deiminase_porph.
[Graphical view]
PfamiPF04371. PAD_porph. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03380. agmatine_aguA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MR-1.

Entry informationi

Entry nameiAGUA_SHEON
AccessioniPrimary (citable) accession number: Q8EIF2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: August 16, 2005
Last modified: November 11, 2015
This is version 75 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.