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Protein
Submitted name:

Diguanylate cyclase with PAS sensory domain

Gene

SO_1695

Organism
Shewanella oneidensis (strain MR-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • diguanylate cyclase activity Source: UniProtKB-EC
  • signal transducer activity Source: TIGR

GO - Biological processi

  • signal transduction Source: TIGR
Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase with PAS sensory domainImported (EC:2.7.7.65Imported)
Gene namesi
Ordered Locus Names:SO_1695Imported
OrganismiShewanella oneidensis (strain MR-1)Imported
Taxonomic identifieri211586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000008186 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PaxDbiQ8EGB0.

Interactioni

Protein-protein interaction databases

STRINGi211586.SO_1695.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3MFXX-ray2.40A/B/C39-158[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8EGB0.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini203 – 339137GGDEFInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains GGDEF domain.SAAS annotation

Phylogenomic databases

eggNOGiENOG4108UBC. Bacteria.
COG2199. LUCA.
HOGENOMiHOG000294195.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR000014. PAS.
[Graphical view]
PfamiPF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00267. GGDEF. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50887. GGDEF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8EGB0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNSPKLARQ QPALSIVDDA ALPTTKQLKD TELPLNFFEH SSLETIELFI
60 70 80 90 100
QHLTEAMILV NANGFIRSCN QRSAELLDCP QVSLKGQDWR NFLTEHHQAR
110 120 130 140 150
YDNLLSHDVQ LGTNCGQPVQ HPAQETTLIC ASGKAKDVEL SISYIPGHEP
160 170 180 190 200
MFVMVMHDLT HHKAENQKLR KLAATDSLTQ LANRRYFDEM LQQHWEECTA
210 220 230 240 250
KLRPISVVII DVDYFKVFND QFGHIQGDEC LRKIAKVIAG IVPTEIGLAA
260 270 280 290 300
RYGGEEFALI LPNHNAKMAL TIAQKIQQGI NNIRFTDQGL RDYVSVSASQ
310 320 330
GIACEVNGQF RTSLAMVCAA DTALYRAKAD GRDRINTSL
Length:339
Mass (Da):37,926
Last modified:January 9, 2013 - v2
Checksum:iD79E7B11A9F39F71
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN54750.2.
RefSeqiNP_717306.2. NC_004347.2.
WP_011071842.1. NC_004347.2.

Genome annotation databases

EnsemblBacteriaiAAN54750; AAN54750; SO_1695.
GeneIDi1169484.
KEGGison:SO_1695.
PATRICi23523025. VBISheOne101494_1634.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN54750.2.
RefSeqiNP_717306.2. NC_004347.2.
WP_011071842.1. NC_004347.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3MFXX-ray2.40A/B/C39-158[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi211586.SO_1695.

Proteomic databases

PaxDbiQ8EGB0.

Protocols and materials databases

DNASUi1169484.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN54750; AAN54750; SO_1695.
GeneIDi1169484.
KEGGison:SO_1695.
PATRICi23523025. VBISheOne101494_1634.

Phylogenomic databases

eggNOGiENOG4108UBC. Bacteria.
COG2199. LUCA.
HOGENOMiHOG000294195.
OrthoDBiEOG6G4VQG.

Miscellaneous databases

EvolutionaryTraceiQ8EGB0.

Family and domain databases

InterProiIPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR000014. PAS.
[Graphical view]
PfamiPF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00267. GGDEF. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MR-1Imported.
  2. "Northeast Structural Genomics Consortium Target SoR288B."
    Forouhar F., Abashidze M., Seetharaman J., Mao M., Xiao R., Ciccosanti C., Lee D., Everett J.K., Nair R., Acton T.B., Rost B., Montelione G.T., Tong L., Hunt J.F.
    Submitted (APR-2010) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS) OF 39-158.

Entry informationi

Entry nameiQ8EGB0_SHEON
AccessioniPrimary (citable) accession number: Q8EGB0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: January 9, 2013
Last modified: March 16, 2016
This is version 72 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.