Q8EG41 (Q8EG41_SHEON) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL AAN54823.2
EC=4.1.1.15 EMBL AAN54823.2

Gene names

Ordered Locus Names:

SO_1769 EMBL AAN54823.2

Organism

Shewanella oneidensis (strain MR-1) [Reference proteome] [HAMAP] EMBL AAN54823.2

Taxonomic identifier

211586 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella oneidensis

Protein attributes

Sequence length	549 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL AAN54823.2
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8EG41 [UniParc]. Last modified January 9, 2013. Version 2. Checksum: ABF5826111B85418	FASTA	549	61,040
	10 20 30 40 50 60 MTQKLPRQAT ASEESLMRIF TVPEDADSTL SIIEQKLSED LAGFLGDSIA ALEKPLSEIE 70 80 90 100 110 120 TDFQTFEIPN QPRFVSDYTD EIMQNLVAHS VHTAAPSFIG HMTSALPYFV LPLSKMMVGL 130 140 150 160 170 180 NQNLVKIETS KAFTPLERQV LGMMHHLIYA QHDDFYRNWM HSANHSLGAF CSGGTVANIT 190 200 210 220 230 240 ALWIARNQLL KADGDFKGVT REGLIKALRH YDYDDLAILV SERGHYSLGK AVDLLGIGRD 250 260 270 280 290 300 NIISIPTDAD NKVDVTQMRK IAVELAHKRI KVMAIVGVAG TTETGNIDPL KQLAALASEL 310 320 330 340 350 360 NCHFHVDAAW GGASLLSNKY RHLLDGVELA DSVTIDAHKQ MYVPMGAGMV LFKNPEFAHA 370 380 390 400 410 420 IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG RDGYEILINN SLEKARYFAE 430 440 450 460 470 480 QIDAHPDFEL VTAPELCLLT YRYVPASVQA AMQVAIEQGD KAKLERFNEQ LDGLTQFIQK 490 500 510 520 530 540 HQREQGKSFV SRTRIQPARY FRQPTVVFRV VLANPLTSHE ILNQVLIEQG EIATLDKEFL PALLAMVAE

References

[1]

"Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis." Heidelberg J.F., Paulsen I.T., Nelson K.E., Gaidos E.J., Nelson W.C., Read T.D., Eisen J.A., Seshadri R., Ward N.L., Methe B.A., Clayton R.A., Meyer T., Tsapin A., Scott J., Beanan M.J., Brinkac L.M., Daugherty S.C., DeBoy R.T. , Dodson R.J., Durkin A.S., Haft D.H., Kolonay J.F., Madupu R., Peterson J.D., Umayam L.A., White O., Wolf A.M., Vamathevan J.J., Weidman J.F., Impraim M., Lee K., Berry K.J., Lee C., Mueller J., Khouri H.M., Gill J., Utterback T.R., McDonald L.A., Feldblyum T.V., Smith H.O., Venter J.C., Nealson K.H., Fraser C.M. Nat. Biotechnol. 20:1118-1123(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MR-1 EMBL AAN54823.2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE014299 Genomic DNA. Translation: AAN54823.2.
RefSeq	NP_717379.2. NC_004347.2.
3D structure databases
ProteinModelPortal	Q8EG41.
ModBase	Search...
Protein-protein interaction databases
STRING	211586.SO_1769.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAN54823; AAN54823; SO_1769.
GeneID	1169543.
KEGG	son:SO_1769.
PATRIC	23523155. VBISheOne101494_1699.
Phylogenomic databases
HOGENOM	HOG000282553.
KO	K01580.
OMA	CHFHVDA.
ProtClustDB	CLSK874231.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR022517. Asp_decarboxylase_pyridox. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8EG41_SHEON

Accession

Primary (citable) accession number: Q8EG41

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	January 9, 2013
Last modified:	May 1, 2013
This is version 66 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)