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Q8EF26

- Y2176_SHEON

UniProt

Q8EF26 - Y2176_SHEON

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Protein

UPF0352 protein SO_2176

Gene

SO_2176

Organism
Shewanella oneidensis (strain MR-1)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0352 protein SO_2176UniRule annotation
Gene namesi
Ordered Locus Names:SO_2176
OrganismiShewanella oneidensis (strain MR-1)
Taxonomic identifieri211586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000008186: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7272UPF0352 protein SO_2176PRO_0000201799Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi211586.SO_2176.

Structurei

Secondary structure

1
72
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi9 – 2618Combined sources
Helixi30 – 4819Combined sources
Helixi51 – 7222Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2JUWNMR-A/B1-72[»]
2QTIX-ray2.30A1-72[»]
ProteinModelPortaliQ8EF26.
SMRiQ8EF26. Positions 1-72.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8EF26.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0352 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG3082.
HOGENOMiHOG000218499.
KOiK09904.
OMAiHQAPTDL.
OrthoDBiEOG615VPH.
PhylomeDBiQ8EF26.

Family and domain databases

Gene3Di1.10.3390.10. 1 hit.
HAMAPiMF_00816. UPF0352.
InterProiIPR009857. UPF0352.
IPR023202. YejL_dom.
[Graphical view]
PfamiPF07208. DUF1414. 1 hit.
[Graphical view]
PIRSFiPIRSF006188. UCP006188. 1 hit.
ProDomiPD027794. UPF0352. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Q8EF26-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAIQSKYSNT QVESLIAEIL VVLEKHKAPT DLSLMALGNC VTHLLERKVP
60 70
SESRQAVAEQ FAKALAQSVK SN
Length:72
Mass (Da):7,865
Last modified:March 1, 2003 - v1
Checksum:i984329157B05567D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN55220.1.
RefSeqiNP_717776.1. NC_004347.2.
WP_011072212.1. NC_004347.2.

Genome annotation databases

EnsemblBacteriaiAAN55220; AAN55220; SO_2176.
GeneIDi1169914.
KEGGison:SO_2176.
PATRICi23523972. VBISheOne101494_2092.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN55220.1 .
RefSeqi NP_717776.1. NC_004347.2.
WP_011072212.1. NC_004347.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2JUW NMR - A/B 1-72 [» ]
2QTI X-ray 2.30 A 1-72 [» ]
ProteinModelPortali Q8EF26.
SMRi Q8EF26. Positions 1-72.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 211586.SO_2176.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAN55220 ; AAN55220 ; SO_2176 .
GeneIDi 1169914.
KEGGi son:SO_2176.
PATRICi 23523972. VBISheOne101494_2092.

Phylogenomic databases

eggNOGi COG3082.
HOGENOMi HOG000218499.
KOi K09904.
OMAi HQAPTDL.
OrthoDBi EOG615VPH.
PhylomeDBi Q8EF26.

Miscellaneous databases

EvolutionaryTracei Q8EF26.

Family and domain databases

Gene3Di 1.10.3390.10. 1 hit.
HAMAPi MF_00816. UPF0352.
InterProi IPR009857. UPF0352.
IPR023202. YejL_dom.
[Graphical view ]
Pfami PF07208. DUF1414. 1 hit.
[Graphical view ]
PIRSFi PIRSF006188. UCP006188. 1 hit.
ProDomi PD027794. UPF0352. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MR-1.

Entry informationi

Entry nameiY2176_SHEON
AccessioniPrimary (citable) accession number: Q8EF26
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: March 1, 2003
Last modified: November 26, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3