Q8EF26 (Y2176_SHEON) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0352 protein SO_2176

Gene names

Ordered Locus Names:

SO_2176

Organism

Shewanella oneidensis (strain MR-1) [Reference proteome] [HAMAP]

Taxonomic identifier

211586 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella oneidensis

Protein attributes

Sequence length	72 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the UPF0352 family.

Ontologies

Keywords
Technical term	3D-structure Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 72

72

UPF0352 protein SO_2176 HAMAP-Rule MF_00816

PRO_0000201799

Secondary structure

1

.

.

.

.

.

.

72

Helix Strand Turn

Details...

Helix

9 – 26

18

Helix

30 – 48

19

Helix

51 – 72

22

Sequences

	Sequence		Length	Mass (Da)
	Q8EF26 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: 984329157B05567D	FASTA	72	7,865
	10 20 30 40 50 60 MAIQSKYSNT QVESLIAEIL VVLEKHKAPT DLSLMALGNC VTHLLERKVP SESRQAVAEQ 70 FAKALAQSVK SN

References

[1]

"Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis." Heidelberg J.F., Paulsen I.T., Nelson K.E., Gaidos E.J., Nelson W.C., Read T.D., Eisen J.A., Seshadri R., Ward N.L., Methe B.A., Clayton R.A., Meyer T., Tsapin A., Scott J., Beanan M.J., Brinkac L.M., Daugherty S.C., DeBoy R.T. , Dodson R.J., Durkin A.S., Haft D.H., Kolonay J.F., Madupu R., Peterson J.D., Umayam L.A., White O., Wolf A.M., Vamathevan J.J., Weidman J.F., Impraim M., Lee K., Berry K.J., Lee C., Mueller J., Khouri H.M., Gill J., Utterback T.R., McDonald L.A., Feldblyum T.V., Smith H.O., Venter J.C., Nealson K.H., Fraser C.M. Nat. Biotechnol. 20:1118-1123(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MR-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE014299 Genomic DNA. Translation: AAN55220.1.

RefSeq

NP_717776.1. NC_004347.2.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2JUW	NMR	-	A/B	1-72	[»]
2QTI	X-ray	2.30	A	1-72	[»]

ProteinModelPortal

Q8EF26.

SMR

Q8EF26. Positions 1-72.

ModBase

Search...

Protein-protein interaction databases

STRING

211586.SO_2176.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

AAN55220; AAN55220; SO_2176.

GeneID

1169914.

KEGG

son:SO_2176.

PATRIC

23523972. VBISheOne101494_2092.

Phylogenomic databases

eggNOG

COG3082.

HOGENOM

HOG000218499.

KO

K09904.

OMA

HQAPTDL.

ProtClustDB

PRK13689.

Family and domain databases

Gene3D

1.10.3390.10. 1 hit.

HAMAP

MF_00816. UPF0352.

InterPro

IPR009857. UPF0352.
IPR023202. YejL_dom.
[Graphical view]

Pfam

PF07208. DUF1414. 1 hit.
[Graphical view]

PIRSF

PIRSF006188. UCP006188. 1 hit.

ProDom

PD027794. UPF0352. 1 hit.
[Graphical view] [Entries sharing at least one domain]

ProtoNet

Search...

Other

EvolutionaryTrace

Q8EF26.

Entry information

Entry name

Y2176_SHEON

Accession

Primary (citable) accession number: Q8EF26

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 22, 2005
Last sequence update:	March 1, 2003
Last modified:	May 1, 2013
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program