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Q8EF26

- Y2176_SHEON

UniProt

Q8EF26 - Y2176_SHEON

Protein

UPF0352 protein SO_2176

Gene

SO_2176

Organism
Shewanella oneidensis (strain MR-1)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    UPF0352 protein SO_2176UniRule annotation
    Gene namesi
    Ordered Locus Names:SO_2176
    OrganismiShewanella oneidensis (strain MR-1)
    Taxonomic identifieri211586 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000008186: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7272UPF0352 protein SO_2176PRO_0000201799Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi211586.SO_2176.

    Structurei

    Secondary structure

    1
    72
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi9 – 2618
    Helixi30 – 4819
    Helixi51 – 7222

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2JUWNMR-A/B1-72[»]
    2QTIX-ray2.30A1-72[»]
    ProteinModelPortaliQ8EF26.
    SMRiQ8EF26. Positions 1-72.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ8EF26.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the UPF0352 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG3082.
    HOGENOMiHOG000218499.
    KOiK09904.
    OMAiHQAPTDL.
    OrthoDBiEOG615VPH.
    PhylomeDBiQ8EF26.

    Family and domain databases

    Gene3Di1.10.3390.10. 1 hit.
    HAMAPiMF_00816. UPF0352.
    InterProiIPR009857. UPF0352.
    IPR023202. YejL_dom.
    [Graphical view]
    PfamiPF07208. DUF1414. 1 hit.
    [Graphical view]
    PIRSFiPIRSF006188. UCP006188. 1 hit.
    ProDomiPD027794. UPF0352. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    Q8EF26-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAIQSKYSNT QVESLIAEIL VVLEKHKAPT DLSLMALGNC VTHLLERKVP   50
    SESRQAVAEQ FAKALAQSVK SN 72
    Length:72
    Mass (Da):7,865
    Last modified:March 1, 2003 - v1
    Checksum:i984329157B05567D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE014299 Genomic DNA. Translation: AAN55220.1.
    RefSeqiNP_717776.1. NC_004347.2.

    Genome annotation databases

    EnsemblBacteriaiAAN55220; AAN55220; SO_2176.
    GeneIDi1169914.
    KEGGison:SO_2176.
    PATRICi23523972. VBISheOne101494_2092.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE014299 Genomic DNA. Translation: AAN55220.1 .
    RefSeqi NP_717776.1. NC_004347.2.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2JUW NMR - A/B 1-72 [» ]
    2QTI X-ray 2.30 A 1-72 [» ]
    ProteinModelPortali Q8EF26.
    SMRi Q8EF26. Positions 1-72.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 211586.SO_2176.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAN55220 ; AAN55220 ; SO_2176 .
    GeneIDi 1169914.
    KEGGi son:SO_2176.
    PATRICi 23523972. VBISheOne101494_2092.

    Phylogenomic databases

    eggNOGi COG3082.
    HOGENOMi HOG000218499.
    KOi K09904.
    OMAi HQAPTDL.
    OrthoDBi EOG615VPH.
    PhylomeDBi Q8EF26.

    Miscellaneous databases

    EvolutionaryTracei Q8EF26.

    Family and domain databases

    Gene3Di 1.10.3390.10. 1 hit.
    HAMAPi MF_00816. UPF0352.
    InterProi IPR009857. UPF0352.
    IPR023202. YejL_dom.
    [Graphical view ]
    Pfami PF07208. DUF1414. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF006188. UCP006188. 1 hit.
    ProDomi PD027794. UPF0352. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MR-1.

    Entry informationi

    Entry nameiY2176_SHEON
    AccessioniPrimary (citable) accession number: Q8EF26
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 22, 2005
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families
    3. Uncharacterized protein families (UPF)
      List of uncharacterized protein family (UPF) entries

    External Data

    Dasty 3