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Protein
Submitted name:

Aspartate aminotransferase AspC

Gene

aspC

Organism
Shewanella oneidensis (strain MR-1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Aspartate aminotransferase AspCImported (EC:2.6.1.1Imported)
Gene namesi
Name:aspCImported
Ordered Locus Names:SO_2350Imported
OrganismiShewanella oneidensis (strain MR-1)Imported
Taxonomic identifieri211586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000008186 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ8EEM8.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi211586.SO_2350.

Structurei

3D structure databases

ProteinModelPortaliQ8EEM8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini28 – 393366Aminotran_1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.
PhylomeDBiQ8EEM8.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8EEM8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIFSQVVLAP ADPILGLTDT FKADPRQDKV NLGVGIYKDE AGQTPVLQSV
60 70 80 90 100
KKAEAILLEQ EKTKNYLGIE GVQTYNRVVQ ELLFGEGSEL VASGRAATAQ
110 120 130 140 150
APGGTGALRI AAEFLLRNTP SRTIWVSNPT WANHQNIFET AGLTVKEFGY
160 170 180 190 200
YNASAHDIDF DGMMTDLANA QAGDIILLHG CCHNPTGIDL TLAQWDLVAN
210 220 230 240 250
LCADKQLVPL FDFAYQGFGT GIEEDAAGLR LVASKVPELL VANSFSKNFG
260 270 280 290 300
LYNERIGAVT VVAHNADEAV RAFSQVKRTI RANYSNPPAH GALIVSTILS
310 320 330 340 350
DAALKALWVQ ELTEMRERIA LMRTLFVQSL KDEGVTQDFS FISRQNGMFS
360 370 380 390
FSGLNKSQVA RLKDEFGVYI VGSGRISVAG MTKANMPAIC KAIAQVV
Length:397
Mass (Da):42,991
Last modified:March 1, 2003 - v1
Checksum:i92B5E189844B0C4F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN55384.1.
RefSeqiNP_717940.1. NC_004347.2.
WP_011072337.1. NC_004347.2.

Genome annotation databases

EnsemblBacteriaiAAN55384; AAN55384; SO_2350.
GeneIDi1170071.
KEGGison:SO_2350.
PATRICi23524321. VBISheOne101494_2261.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN55384.1.
RefSeqiNP_717940.1. NC_004347.2.
WP_011072337.1. NC_004347.2.

3D structure databases

ProteinModelPortaliQ8EEM8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi211586.SO_2350.

Proteomic databases

PaxDbiQ8EEM8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN55384; AAN55384; SO_2350.
GeneIDi1170071.
KEGGison:SO_2350.
PATRICi23524321. VBISheOne101494_2261.

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.
PhylomeDBiQ8EEM8.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MR-1Imported.

Entry informationi

Entry nameiQ8EEM8_SHEON
AccessioniPrimary (citable) accession number: Q8EEM8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: March 16, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.