Glucoamylase - Shewanella oneidensis

Preferred order of sections

Names and origin

Protein names

Submitted name:
Glucoamylase EMBL AAN55493.1

Gene names

Name:	cga EMBL AAN55493.1
Ordered Locus Names:	SO_2459

Organism

Shewanella oneidensis

Taxonomic identifier

70863 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	847 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	polysaccharide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro glucan 1,4-alpha-glucosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q8EEC3 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: F1155C9BC3885ABA
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FASTA

847

91,885

        10         20         30         40         50         60 
MNMPFTEQPK QDCGQLKQHS SSLTLKPIAL AITASLIGLA SLSACSPIAD KSASSTTSNA 

        70         80         90        100        110        120 
VSNNEINTAS YNIAPGAPGK APTWAFSGKT GIGTSYEPYT QGQYQDSQQN PISRVWFSIA 

       130        140        150        160        170        180 
QGILTETMFG LIHNAQLKEL QFVITGNGFV DTEKDNTISS IEYLDTDANG RPQSLAYKII 

       190        200        210        220        230        240 
NRDVEGKYQI EKHIFTDPGR DTLVMRVTFT AFEAGITPHL YVNPHIDNAG ANDIGRIDHQ 

       250        260        270        280        290        300 
ALIAYTAAPH SSVMTVKSDI NFVRATTGFE GISDGLADLA DNGTLDTLYS ATSAPDNRTQ 

       310        320        330        340        350        360 
GNIAFTASYP EVTPNQPLNI NLAIGFGHDE LSSLTNAKAT LNAGYDAVLG QYNAGWRSYL 

       370        380        390        400        410        420 
QSLPAIAGMA KSTTDNGKLL YTSAMVLKAQ EDKTYAGALI ASLSNPWGDT VSAITPSTGY 

       430        440        450        460        470        480 
KAVWPRDFYQ CAMAFLAMGD TQTPKVAFEY LKKVQVSDKT SGFSGTPGWF LQKTHVDGQI 

       490        500        510        520        530        540 
EWVGVQLDQT AMPIMLGWKL WQAGGLSQTE LSYWYQEMLK GAADFLVSGG EVNLDWNHTP 

       550        560        570        580        590        600 
VTPPKTQQER WEEQAGFSPS TTAAVIAGLV TASDIAKAVN DLNASQRYLD SAKTLNQQLE 

       610        620        630        640        650        660 
KHLVTTQGLL TDSQGVSTPY YLRLSPHGEP NTATKLAANN GKAGLDQRQI LDAGFLELVR 

       670        680        690        700        710        720 
YGVRGATDKL INQSLALVDN TKLEDNLRLK YSFTAKDGSS VPGFRRYGND GYGEDTVTGA 

       730        740        750        760        770        780 
NYAESGGNSD NQRGRVWPFF TGERGHFELA LASAKGELTG TKGQQTKQQL INTYVQGMET 

       790        800        810        820        830        840 
FANAGMMLPE QAWDGVGNAT RYQYRLGQGT NSATPLAWTH AEYIKLVRSM NDGQLWDHYP 


IVPETLK

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References

[1]

"Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis."
Heidelberg J.F., Paulsen I.T., Nelson K.E., Gaidos E.J., Nelson W.C., Read T.D., Eisen J.A., Seshadri R., Ward N.L., Methe B.A., Clayton R.A., Meyer T., Tsapin A., Scott J., Beanan M.J., Brinkac L.M., Daugherty S.C., DeBoy R.T.

Fraser C.M.
Nat. Biotechnol. 20:1118-1123(2002) [PubMed: 12368813] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MR-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE014299 Genomic DNA. Translation: AAN55493.1.
RefSeq	NP_718049.1. NC_004347.1.
3D structure databases
HSSP	HSSP built from PDB template 1LF6 based on UniProtKB O85672.
ProteinModelPortal	Q8EEC3.
ModBase	Search...
Protein family/group databases
CAZy	GH15. Glycoside Hydrolase Family 15.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1170173.
GenomeReviews	Gene locus SO_2459 in contig AE014299_GR.
KEGG	son:SO_2459.
NMPDR	fig\|211586.1.peg.2229.
PATRIC	23524537. VBISheOne101494_2368.
TIGR	SO_2459.
Phylogenomic databases
HOGENOM	HBG290978.
OMA	RWEENAG.
ProtClustDB	CLSK890895.
Enzyme and pathway databases
BioCyc	SONE211586:SO_2459-MONOMER.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR015220. Glucodextran_N. IPR011013. Glyco_hydro-type_carb-bd. IPR014718. Glyco_hydro-type_carb-bd_sub. IPR011613. Glyco_hydro_15. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit. G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit.
Pfam	PF09137. Glucodextran_N. 1 hit. PF00723. Glyco_hydro_15. 1 hit. [Graphical view]
SUPFAM	SSF74650. Gal_mut_like. 1 hit. SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8EEC3_SHEON

Accession

Primary (citable) accession number: Q8EEC3

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	March 1, 2003
Last modified:	January 25, 2012
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein family/group databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry information