Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q8EDX5

- DCD_SHEON

UniProt

Q8EDX5 - DCD_SHEON

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Deoxycytidine triphosphate deaminase

Gene

dcd

Organism
Shewanella oneidensis (strain MR-1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

dCTP + H2O = dUTP + NH3.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. dCTP deaminase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. dUMP biosynthetic process Source: UniProtKB-UniPathway
  2. dUTP biosynthetic process Source: InterPro
  3. pyrimidine ribonucleotide biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Nucleotide metabolism

Enzyme and pathway databases

UniPathwayiUPA00610; UER00665.

Names & Taxonomyi

Protein namesi
Recommended name:
Deoxycytidine triphosphate deaminaseUniRule annotation (EC:3.5.4.13UniRule annotation)
Short name:
dCTP deaminaseUniRule annotation
Gene namesi
Name:dcdUniRule annotation
Ordered Locus Names:SO_2616
OrganismiShewanella oneidensis (strain MR-1)
Taxonomic identifieri211586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000008186: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 193193Deoxycytidine triphosphate deaminasePRO_0000156012Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi211586.SO_2616.

Structurei

3D structure databases

ProteinModelPortaliQ8EDX5.
SMRiQ8EDX5. Positions 1-193.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the dCTP deaminase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0717.
HOGENOMiHOG000228601.
KOiK01494.
OMAiRPGMMIG.
OrthoDBiEOG67DPKR.
PhylomeDBiQ8EDX5.

Family and domain databases

Gene3Di2.70.40.10. 1 hit.
HAMAPiMF_00146. dCTP_deaminase.
InterProiIPR011962. dCTP_deam.
IPR029054. dUTPase-like.
IPR008180. dUTPase/dCTP_deaminase.
[Graphical view]
PfamiPF00692. dUTPase. 1 hit.
[Graphical view]
SUPFAMiSSF51283. SSF51283. 1 hit.
TIGRFAMsiTIGR02274. dCTP_deam. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8EDX5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRLTDIEIEQ ALDNGTIVIE PRPNNDAISG VSVDVRLGGQ FRVFKDHTAP
60 70 80 90 100
FIDLSGPSGE VQAALDRVMS EIIEIPDGEA FFLHPGELAL AVTYESVTLP
110 120 130 140 150
ADIVGWLDGR SSLARLGLMV HVTAHRIDPG WQGKIVLEFY NSGKLPLALR
160 170 180 190
PRMTIGALNF ERLSGPVARP YNKRKNAKYK DQQDAVASRI SQD
Length:193
Mass (Da):21,218
Last modified:March 1, 2003 - v1
Checksum:i1EF41BA888681B1B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN55645.1.
RefSeqiNP_718201.1. NC_004347.2.
WP_011072565.1. NC_004347.2.

Genome annotation databases

EnsemblBacteriaiAAN55645; AAN55645; SO_2616.
GeneIDi1170318.
KEGGison:SO_2616.
PATRICi23524859. VBISheOne101494_2519.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN55645.1 .
RefSeqi NP_718201.1. NC_004347.2.
WP_011072565.1. NC_004347.2.

3D structure databases

ProteinModelPortali Q8EDX5.
SMRi Q8EDX5. Positions 1-193.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 211586.SO_2616.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAN55645 ; AAN55645 ; SO_2616 .
GeneIDi 1170318.
KEGGi son:SO_2616.
PATRICi 23524859. VBISheOne101494_2519.

Phylogenomic databases

eggNOGi COG0717.
HOGENOMi HOG000228601.
KOi K01494.
OMAi RPGMMIG.
OrthoDBi EOG67DPKR.
PhylomeDBi Q8EDX5.

Enzyme and pathway databases

UniPathwayi UPA00610 ; UER00665 .

Family and domain databases

Gene3Di 2.70.40.10. 1 hit.
HAMAPi MF_00146. dCTP_deaminase.
InterProi IPR011962. dCTP_deam.
IPR029054. dUTPase-like.
IPR008180. dUTPase/dCTP_deaminase.
[Graphical view ]
Pfami PF00692. dUTPase. 1 hit.
[Graphical view ]
SUPFAMi SSF51283. SSF51283. 1 hit.
TIGRFAMsi TIGR02274. dCTP_deam. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MR-1.

Entry informationi

Entry nameiDCD_SHEON
AccessioniPrimary (citable) accession number: Q8EDX5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 23, 2003
Last sequence update: March 1, 2003
Last modified: November 26, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3