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Q8EDX5

- DCD_SHEON

UniProt

Q8EDX5 - DCD_SHEON

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Protein

Deoxycytidine triphosphate deaminase

Gene
dcd, SO_2616
Organism
Shewanella oneidensis (strain MR-1)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

dCTP + H2O = dUTP + NH3.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. dCTP deaminase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. dUMP biosynthetic process Source: UniProtKB-UniPathway
  2. dUTP biosynthetic process Source: InterPro
  3. pyrimidine ribonucleotide biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Nucleotide metabolism

Enzyme and pathway databases

UniPathwayiUPA00610; UER00665.

Names & Taxonomyi

Protein namesi
Recommended name:
Deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Short name:
dCTP deaminase
Gene namesi
Name:dcd
Ordered Locus Names:SO_2616
OrganismiShewanella oneidensis (strain MR-1)
Taxonomic identifieri211586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000008186: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 193193Deoxycytidine triphosphate deaminaseUniRule annotationPRO_0000156012Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi211586.SO_2616.

Structurei

3D structure databases

ProteinModelPortaliQ8EDX5.
SMRiQ8EDX5. Positions 1-193.

Family & Domainsi

Sequence similaritiesi

Belongs to the dCTP deaminase family.

Phylogenomic databases

eggNOGiCOG0717.
HOGENOMiHOG000228601.
KOiK01494.
OMAiRPGMMIG.
OrthoDBiEOG67DPKR.
PhylomeDBiQ8EDX5.

Family and domain databases

Gene3Di2.70.40.10. 1 hit.
HAMAPiMF_00146. dCTP_deaminase.
InterProiIPR011962. dCTP_deam.
IPR029054. dUTPase-like.
IPR008180. dUTPase/dCTP_deaminase.
[Graphical view]
PfamiPF00692. dUTPase. 1 hit.
[Graphical view]
SUPFAMiSSF51283. SSF51283. 1 hit.
TIGRFAMsiTIGR02274. dCTP_deam. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8EDX5-1 [UniParc]FASTAAdd to Basket

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MRLTDIEIEQ ALDNGTIVIE PRPNNDAISG VSVDVRLGGQ FRVFKDHTAP    50
FIDLSGPSGE VQAALDRVMS EIIEIPDGEA FFLHPGELAL AVTYESVTLP 100
ADIVGWLDGR SSLARLGLMV HVTAHRIDPG WQGKIVLEFY NSGKLPLALR 150
PRMTIGALNF ERLSGPVARP YNKRKNAKYK DQQDAVASRI SQD 193
Length:193
Mass (Da):21,218
Last modified:March 1, 2003 - v1
Checksum:i1EF41BA888681B1B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE014299 Genomic DNA. Translation: AAN55645.1.
RefSeqiNP_718201.1. NC_004347.2.
WP_011072565.1. NC_004347.2.

Genome annotation databases

EnsemblBacteriaiAAN55645; AAN55645; SO_2616.
GeneIDi1170318.
KEGGison:SO_2616.
PATRICi23524859. VBISheOne101494_2519.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE014299 Genomic DNA. Translation: AAN55645.1 .
RefSeqi NP_718201.1. NC_004347.2.
WP_011072565.1. NC_004347.2.

3D structure databases

ProteinModelPortali Q8EDX5.
SMRi Q8EDX5. Positions 1-193.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 211586.SO_2616.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAN55645 ; AAN55645 ; SO_2616 .
GeneIDi 1170318.
KEGGi son:SO_2616.
PATRICi 23524859. VBISheOne101494_2519.

Phylogenomic databases

eggNOGi COG0717.
HOGENOMi HOG000228601.
KOi K01494.
OMAi RPGMMIG.
OrthoDBi EOG67DPKR.
PhylomeDBi Q8EDX5.

Enzyme and pathway databases

UniPathwayi UPA00610 ; UER00665 .

Family and domain databases

Gene3Di 2.70.40.10. 1 hit.
HAMAPi MF_00146. dCTP_deaminase.
InterProi IPR011962. dCTP_deam.
IPR029054. dUTPase-like.
IPR008180. dUTPase/dCTP_deaminase.
[Graphical view ]
Pfami PF00692. dUTPase. 1 hit.
[Graphical view ]
SUPFAMi SSF51283. SSF51283. 1 hit.
TIGRFAMsi TIGR02274. dCTP_deam. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MR-1.

Entry informationi

Entry nameiDCD_SHEON
AccessioniPrimary (citable) accession number: Q8EDX5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 23, 2003
Last sequence update: March 1, 2003
Last modified: September 3, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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