Q8EC00 (Q8EC00_SHEON) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Translation initiation factor protein YciH EMBL AAN56343.1

Gene names

Name:	yciH EMBL AAN56343.1
Ordered Locus Names:	SO_3345 EMBL AAN56343.1

Organism

Shewanella oneidensis (strain MR-1) [Reference proteome] [HAMAP] EMBL AAN56343.1

Taxonomic identifier

211586 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella oneidensis

Protein attributes

Sequence length	109 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Protein biosynthesis
Molecular function	Initiation factor EMBL AAN56343.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	translation initiation factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8EC00 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: B43DCB25ED64A74F	FASTA	109	11,724
	10 20 30 40 50 60 MRVDPNVSLV YSTDKGRITA EPEAKAIPTS DGIVRIHRDS KGRKGKGVSV ISGLGLDEAG 70 80 90 100 LKALAQTLKK QCGCGGTVKD FTIEVQTDNR EQLKQLLEKQ NYKVKLAGG

References

[1]

"Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis." Heidelberg J.F., Paulsen I.T., Nelson K.E., Gaidos E.J., Nelson W.C., Read T.D., Eisen J.A., Seshadri R., Ward N.L., Methe B.A., Clayton R.A., Meyer T., Tsapin A., Scott J., Beanan M.J., Brinkac L.M., Daugherty S.C., DeBoy R.T. , Dodson R.J., Durkin A.S., Haft D.H., Kolonay J.F., Madupu R., Peterson J.D., Umayam L.A., White O., Wolf A.M., Vamathevan J.J., Weidman J.F., Impraim M., Lee K., Berry K.J., Lee C., Mueller J., Khouri H.M., Gill J., Utterback T.R., McDonald L.A., Feldblyum T.V., Smith H.O., Venter J.C., Nealson K.H., Fraser C.M. Nat. Biotechnol. 20:1118-1123(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MR-1 EMBL AAN56343.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE014299 Genomic DNA. Translation: AAN56343.1.
RefSeq	NP_718899.1. NC_004347.2.
3D structure databases
HSSP	HSSP built from PDB template 1D1R based on UniProtKB P08245.
ProteinModelPortal	Q8EC00.
ModBase	Search...
Protein-protein interaction databases
STRING	211586.SO_3345.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAN56343; AAN56343; SO_3345.
GeneID	1171027.
KEGG	son:SO_3345.
PATRIC	23526364. VBISheOne101494_3245.
Phylogenomic databases
HOGENOM	HOG000279814.
KO	K03113.
OMA	IEIQGDN.
ProtClustDB	PRK09019.
Family and domain databases
InterPro	IPR005872. SUI1_arc_bac. IPR001950. TIF_SUI1. [Graphical view]
Pfam	PF01253. SUI1. 1 hit. [Graphical view]
PIRSF	PIRSF037511. Transl_init_SUI1_pro. 1 hit.
SUPFAM	SSF55159. TIF_SUI1. 1 hit.
TIGRFAMs	TIGR01158. SUI1_rel. 1 hit.
PROSITE	PS50296. SUI1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8EC00_SHEON

Accession

Primary (citable) accession number: Q8EC00

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	March 1, 2003
Last modified:	May 1, 2013
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)