Q8EB92 (APAG_SHEON) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 54.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Protein ApaG | ||||
| Gene names |
| ||||
| Organism | Shewanella oneidensis | ||||
| Taxonomic identifier | 70863 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella |
Protein attributes
| Sequence length | 126 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Sequence similarities | Contains 1 apaG domain. |
Ontologies
| Keywords | |
|---|---|
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 126 | 126 | Protein ApaG HAMAP MF_00791 | PRO_0000197963 | |||||||||||||||||||||
Regions | |||||||||||||||||||||||||
| Domain | 2 – 126 | 125 | ApaG | ||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||
| Helix | 4 – 6 | 3 | |||||||||||||||||||||||
| Beta strand | 8 – 19 | 12 | |||||||||||||||||||||||
| Beta strand | 28 – 38 | 11 | |||||||||||||||||||||||
| Beta strand | 40 – 42 | 3 | |||||||||||||||||||||||
| Beta strand | 44 – 55 | 12 | |||||||||||||||||||||||
| Beta strand | 60 – 68 | 9 | |||||||||||||||||||||||
| Beta strand | 79 – 104 | 26 | |||||||||||||||||||||||
| Beta strand | 109 – 120 | 12 | |||||||||||||||||||||||
Sequences
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References
| [1] | "Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis." Heidelberg J.F., Paulsen I.T., Nelson K.E., Gaidos E.J., Nelson W.C., Read T.D., Eisen J.A., Seshadri R., Ward N.L., Methe B.A., Clayton R.A., Meyer T., Tsapin A., Scott J., Beanan M.J., Brinkac L.M., Daugherty S.C., DeBoy R.T. Fraser C.M.Nat. Biotechnol. 20:1118-1123(2002) [PubMed: 12368813] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MR-1. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AE014299 Genomic DNA. Translation: AAN56626.1. | ||||||||||||
| RefSeq | NP_719182.1. NC_004347.1. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| ProteinModelPortal | Q8EB92. | ||||||||||||
| SMR | Q8EB92. Positions 3-123. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protocols and materials databases | |||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| GeneID | 1171301. | ||||||||||||
| GenomeReviews | Gene locus SO_3640 in contig AE014299_GR. | ||||||||||||
| KEGG | son:SO_3640. | ||||||||||||
| NMPDR | fig|211586.1.peg.3313. | ||||||||||||
| PATRIC | 23526968. VBISheOne101494_3529. | ||||||||||||
| TIGR | SO_3640. | ||||||||||||
Phylogenomic databases | |||||||||||||
| HOGENOM | HBG746214. | ||||||||||||
| OMA | SRHWVIT. | ||||||||||||
| ProtClustDB | PRK05461. | ||||||||||||
Enzyme and pathway databases | |||||||||||||
| BioCyc | SONE211586:SO_3640-MONOMER. | ||||||||||||
Family and domain databases | |||||||||||||
| HAMAP | MF_00791. ApaG. [Tree] | ||||||||||||
| InterPro | IPR007474. ApaG_domain. IPR023065. Uncharacterised_ApaG. [Graphical view] | ||||||||||||
| Gene3D | G3DSA:2.60.40.1470. ApaG. 1 hit. | ||||||||||||
| KO | K06195. | ||||||||||||
| Pfam | PF04379. DUF525. 1 hit. [Graphical view] | ||||||||||||
| SUPFAM | SSF110069. ApaG. 1 hit. | ||||||||||||
| PROSITE | PS51087. APAG. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Entry information
| Entry name | APAG_SHEON | ||||||||
| Accession | Primary (citable) accession number: Q8EB92 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with