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Protein
Submitted name:

Octaheme tetrathionate reductase Otr

Gene

otr

Organism
Shewanella oneidensis (strain MR-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi22 – 221Iron (heme 1 axial ligand); via tele nitrogenCombined sources
Binding sitei40 – 401Heme 1 (covalent)Combined sources
Metal bindingi44 – 441Iron (heme 1 axial ligand); via tele nitrogenCombined sources
Metal bindingi56 – 561Iron (heme 3 axial ligand); via tele nitrogenCombined sources
Metal bindingi74 – 741Iron (heme 4 axial ligand)Combined sources
Binding sitei95 – 951Heme 4 (covalent)Combined sources
Binding sitei116 – 1161Heme 2 (covalent)Combined sources
Metal bindingi120 – 1201Iron (heme 2 axial ligand); via tele nitrogenCombined sources
Binding sitei157 – 1571Heme 3 (covalent)Combined sources
Binding sitei160 – 1601Heme 3 (covalent)Combined sources
Metal bindingi161 – 1611Iron (heme 3 axial ligand); via tele nitrogenCombined sources
Metal bindingi189 – 1891Iron (heme 6 axial ligand); via tele nitrogenCombined sources
Binding sitei199 – 1991Heme 5 (covalent)Combined sources
Binding sitei202 – 2021Heme 5 (covalent)Combined sources
Metal bindingi203 – 2031Iron (heme 5 axial ligand); via tele nitrogenCombined sources
Metal bindingi208 – 2081Iron (heme 2 axial ligand); via tele nitrogenCombined sources
Binding sitei227 – 2271Heme 6 (covalent)Combined sources
Binding sitei230 – 2301Heme 6 (covalent)Combined sources
Metal bindingi231 – 2311Iron (heme 6 axial ligand); via tele nitrogenCombined sources
Metal bindingi236 – 2361Iron (heme 7 axial ligand); via tele nitrogenCombined sources
Metal bindingi244 – 2441Iron (heme 8 axial ligand); via tele nitrogenCombined sources
Binding sitei250 – 2501Heme 7 (covalent)Combined sources
Binding sitei253 – 2531Heme 7 (covalent)Combined sources
Metal bindingi254 – 2541Iron (heme 7 axial ligand); via tele nitrogenCombined sources
Metal bindingi418 – 4181Iron (heme 5 axial ligand); via tele nitrogenCombined sources
Binding sitei429 – 4291Heme 8 (covalent)Combined sources
Binding sitei432 – 4321Heme 8 (covalent)Combined sources
Metal bindingi433 – 4331Iron (heme 8 axial ligand); via tele nitrogenCombined sources

GO - Molecular functioni

  • electron carrier activity Source: TIGR
  • metal ion binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Electron transportSAAS annotation, Transport

Keywords - Ligandi

HemeCombined sourcesSAAS annotation, Iron, Metal-binding

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-18518.

Names & Taxonomyi

Protein namesi
Submitted name:
Octaheme tetrathionate reductase OtrImported
Gene namesi
Name:otrImported
Ordered Locus Names:SO_4144Imported
OrganismiShewanella oneidensis (strain MR-1)Imported
Taxonomic identifieri211586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000008186 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 461443Sequence analysisPRO_5004307080Add
BLAST

Proteomic databases

PaxDbiQ8E9W8.

Interactioni

Protein-protein interaction databases

STRINGi211586.SO_4144.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1SP3X-ray2.20A19-461[»]
ProteinModelPortaliQ8E9W8.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8E9W8.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini35 – 259225Cytochrome cInterPro annotationAdd
BLAST
Domaini424 – 43815Cytochrome cInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG41061YE. Bacteria.
ENOG410XPE0. LUCA.
HOGENOMiHOG000000811.
OMAiSRIWPFK.
OrthoDBiEOG69D37W.

Family and domain databases

Gene3Di1.10.1130.10. 2 hits.
InterProiIPR023155. Cyt_c-552/4.
IPR011031. Multihaem_cyt.
IPR024673. Octahem_Cyt_c.
IPR012286. Tetrahaem_cytochrome.
[Graphical view]
PfamiPF13435. Cytochrome_C554. 1 hit.
PF11783. Cytochrome_cB. 1 hit.
[Graphical view]
PIRSFiPIRSF039014. OTR_cyc. 1 hit.
SUPFAMiSSF48695. SSF48695. 1 hit.
TIGRFAMsiTIGR04315. octaheme_Shew. 1 hit.
PROSITEiPS51008. MULTIHEME_CYTC. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8E9W8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQLLFIALA GMALQAQAAN PHKDVLKGPF TTGSEVTTQC LTCHEEQATD
60 70 80 90 100
MMKTSHWTWE LEQKLPDRTV VRGKKNSINN FCVAISSNEP RCTSCHAGYG
110 120 130 140 150
WKDNTFDFKD KTKVDCLICH DTTGTYVKDP AGAGEPMAKL DLAKIAQNVG
160 170 180 190 200
APVRDNCGSC HFYGGGGDAV KHGDLDSSMA YPDKATDVHM DSDGNNFQCQ
210 220 230 240 250
NCHTTEKHQI SGNAMGVSPG GIDHIGCENC HDSAPHSNKK LNTHTATVAC
260 270 280 290 300
QTCHIPFFAK NEPTKMQWDW STAGDDKPET VDQYGKHTYQ KKKGNFVWEK
310 320 330 340 350
MVKPQYAWYN GTANAYMAGD KMDSNVVTKL TYPMGDINDA KAKIYPFKVH
360 370 380 390 400
TGKQIYDKKL NIFITPKTYG KGGYWSEFDW NLAAKLGMEA NPTMLEKGIK
410 420 430 440 450
YSGEYDFAAT EMWWRINHMV SPKEQALNCN DCHNKGTRLD WQALGYQGDP
460
MKNKQGPKHK Q
Length:461
Mass (Da):51,400
Last modified:March 1, 2003 - v1
Checksum:i4DC5C74CF0AAA73D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN57117.1.
RefSeqiNP_719673.1. NC_004347.2.
WP_011073841.1. NC_004347.2.

Genome annotation databases

EnsemblBacteriaiAAN57117; AAN57117; SO_4144.
GeneIDi1171753.
KEGGison:SO_4144.
PATRICi23527924. VBISheOne101494_4006.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA. Translation: AAN57117.1.
RefSeqiNP_719673.1. NC_004347.2.
WP_011073841.1. NC_004347.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1SP3X-ray2.20A19-461[»]
ProteinModelPortaliQ8E9W8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi211586.SO_4144.

Proteomic databases

PaxDbiQ8E9W8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN57117; AAN57117; SO_4144.
GeneIDi1171753.
KEGGison:SO_4144.
PATRICi23527924. VBISheOne101494_4006.

Phylogenomic databases

eggNOGiENOG41061YE. Bacteria.
ENOG410XPE0. LUCA.
HOGENOMiHOG000000811.
OMAiSRIWPFK.
OrthoDBiEOG69D37W.

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-18518.

Miscellaneous databases

EvolutionaryTraceiQ8E9W8.

Family and domain databases

Gene3Di1.10.1130.10. 2 hits.
InterProiIPR023155. Cyt_c-552/4.
IPR011031. Multihaem_cyt.
IPR024673. Octahem_Cyt_c.
IPR012286. Tetrahaem_cytochrome.
[Graphical view]
PfamiPF13435. Cytochrome_C554. 1 hit.
PF11783. Cytochrome_cB. 1 hit.
[Graphical view]
PIRSFiPIRSF039014. OTR_cyc. 1 hit.
SUPFAMiSSF48695. SSF48695. 1 hit.
TIGRFAMsiTIGR04315. octaheme_Shew. 1 hit.
PROSITEiPS51008. MULTIHEME_CYTC. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MR-1Imported.
  2. Cited for: X-RAY CRYSTALLOGRAPHY (2.20 ANGSTROMS) OF 19-461 IN COMPLEX WITH HEME.

Entry informationi

Entry nameiQ8E9W8_SHEON
AccessioniPrimary (citable) accession number: Q8E9W8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: May 11, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.