Q8E9E1 (Q8E9E1_SHEON) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aminotransferase, class V EMBL AAN57311.1

Gene names

Ordered Locus Names:

SO_4343

Organism

Shewanella oneidensis

Taxonomic identifier

70863 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	378 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU004504 SAAS SAAS020578
Sequence similarities	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU004075

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020578
Molecular function	Aminotransferase EMBL AAN57311.1 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8E9E1 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: 9051D9139B1AF86D	FASTA	378	40,909
	10 20 30 40 50 60 MMLPAPHFSA FNPPRRILMG PGPSDVYPEV LAAQARPTVG HLDPLFVSMM DELKSLIQYA 70 80 90 100 110 120 FQTKNEMTMA VSAPGSAGME TCFVNLVEPG EKVIVCRNGV FGERMRQNVE RVGAIAVLVD 130 140 150 160 170 180 NEWGTPVDPV AVEAALKAHP DAKFLAFVHA ETSTGALSDA KTLCALAKQY GCLSIVDAVT 190 200 210 220 230 240 SLGGVELRVD EWGIDAIYSG SQKCLSCVPG LSPVSFSPAA VEKLKNRKTP VQSWFLDQSL 250 260 270 280 290 300 VMAYWTSAGG KRSYHHTAPV NALYAMHESL RILAAEGLEN AWKRHQDMHL VLRAGLEKLG 310 320 330 340 350 360 LKFVVAEASR LPQLNAIYIP EGVDDAAVRA RLLKDYNLEI GAGLGALAGK AWRIGLMGFG 370 ARRENVALCL RALEEVLN

References

[1]

"Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis." Heidelberg J.F., Paulsen I.T., Nelson K.E., Gaidos E.J., Nelson W.C., Read T.D., Eisen J.A., Seshadri R., Ward N.L., Methe B.A., Clayton R.A., Meyer T., Tsapin A., Scott J., Beanan M.J., Brinkac L.M., Daugherty S.C., DeBoy R.T. , Dodson R.J., Durkin A.S., Haft D.H., Kolonay J.F., Madupu R., Peterson J.D., Umayam L.A., White O., Wolf A.M., Vamathevan J.J., Weidman J.F., Impraim M., Lee K., Berry K.J., Lee C., Mueller J., Khouri H.M., Gill J., Utterback T.R., McDonald L.A., Feldblyum T.V., Smith H.O., Venter J.C., Nealson K.H., Fraser C.M. Nat. Biotechnol. 20:1118-1123(2002) [PubMed: 12368813] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MR-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE014299 Genomic DNA. Translation: AAN57311.1.
RefSeq	NP_719867.1. NC_004347.1.
3D structure databases
HSSP	HSSP built from PDB template 1H0C based on UniProtKB P21549.
ProteinModelPortal	Q8E9E1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1171947.
GenomeReviews	Gene locus SO_4343 in contig AE014299_GR.
KEGG	son:SO_4343.
NMPDR	fig|211586.1.peg.3943.
PATRIC	23528344. VBISheOne101494_4207.
TIGR	SO_4343.
Phylogenomic databases
HOGENOM	HBG700056.
OMA	MRQNVER.
ProtClustDB	CLSK873957.
Enzyme and pathway databases
BioCyc	SONE211586:SO_4343-MONOMER.
Family and domain databases
InterPro	IPR000192. Aminotrans_V/Cys_dSase. IPR020578. Aminotrans_V_PyrdxlP_BS. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. IPR024169. SP_NH2Trfase/AEP_transaminase. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K00830.
Pfam	PF00266. Aminotran_5. 1 hit. [Graphical view]
PIRSF	PIRSF000524. SPT. 1 hit.
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00595. AA_TRANSFER_CLASS_5. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8E9E1_SHEON

Accession

Primary (citable) accession number: Q8E9E1

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	March 1, 2003
Last modified:	December 14, 2011
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)