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Protein
Submitted name:

1,4-beta-N-acetylmuramidase

Gene

lytC

Organism
Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei398N-acetyl-D-glucosamineCombined sources1
Binding sitei438N-acetyl-D-glucosamineCombined sources1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciSPNE171101:G1FZH-1468-MONOMER

Protein family/group databases

CAZyiGH25 Glycoside Hydrolase Family 25

Names & Taxonomyi

Protein namesi
Submitted name:
1,4-beta-N-acetylmuramidaseImported (EC:3.2.1.17Imported)
Gene namesi
Name:lytCImported
Ordered Locus Names:spr1431Imported
OrganismiStreptococcus pneumoniae (strain ATCC BAA-255 / R6)Imported
Taxonomic identifieri171101 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000000586 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 33Sequence analysisAdd BLAST33
ChainiPRO_500430760234 – 501Sequence analysisAdd BLAST468

Interactioni

Protein-protein interaction databases

STRINGi171101.spr1431

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2WW5X-ray1.61A34-501[»]
2WWCX-ray1.75A34-501[»]
2WWDX-ray2.25A34-501[»]
ProteinModelPortaliQ8DP07
SMRiQ8DP07
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8DP07

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati89 – 110Cell wall-bindingPROSITE-ProRule annotationAdd BLAST22
Repeati129 – 150Cell wall-bindingPROSITE-ProRule annotationAdd BLAST22
Repeati152 – 171Cell wall-bindingPROSITE-ProRule annotationAdd BLAST20
Repeati190 – 211Cell wall-bindingPROSITE-ProRule annotationAdd BLAST22
Repeati213 – 232Cell wall-bindingPROSITE-ProRule annotationAdd BLAST20
Repeati276 – 295Cell wall-bindingPROSITE-ProRule annotationAdd BLAST20

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4108J4D Bacteria
COG5263 LUCA
HOGENOMiHOG000285086
KOiK01185
OMAiAMIQNEW

Family and domain databases

InterProiView protein in InterPro
IPR018337 Cell_wall/Cho-bd_repeat
IPR002053 Glyco_hydro_25
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF01473 CW_binding_1, 4 hits
PF01183 Glyco_hydro_25, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit
PROSITEiView protein in PROSITE
PS51170 CW, 6 hits

Sequencei

Sequence statusi: Complete.

Q8DP07-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVTFFIGEE RLKIKIGLAS ICLLGLATSH VAANETEVAK TSQDTTTASS
60 70 80 90 100
SSEQNQSSNK TQTSAEVQTN AAAYWDGDYY VKDDGSKAQS EWIFDNYYKA
110 120 130 140 150
WFYINSDGRY SQNEWHGNYY LKSGGYMAQN EWIYDSNYKS WFYLKSDGAY
160 170 180 190 200
AHQEWQLIGN KWYYFKKWGY MAKSQWQGSY FLNGQGAMIQ NEWLYDPAYS
210 220 230 240 250
AYFYLKSDGT YANQEWQKVG GKWYYFKKWG YMARNEWQGN YYLTGSGAMA
260 270 280 290 300
TDEVIMDGAR YIFAASGELK EKKDLNVGWV HRDGKRYFFN NREEQVGTEH
310 320 330 340 350
AKKIIDISEH NGRINDWKKV IDENKVDGVI VRLGYSGKED KELAHNIKEL
360 370 380 390 400
NRLGIPYGVY LYTYAENETD AENDAKQTIE LIKKYNMNLS YPIYYDVENW
410 420 430 440 450
EYVNKSKRAP SDTDTWVKII NKYMDTMKQA GYQNVYVYSY RSLLQTRLKH
460 470 480 490 500
PDILKHVNWV AAYTNALEWE NPYYSGEKGW QYTSSEYMKG IQGRVDVSVW

Y
Length:501
Mass (Da):58,681
Last modified:March 1, 2003 - v1
Checksum:iA2D74FC911241DA4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007317 Genomic DNA Translation: AAL00235.1
PIRiF98050
RefSeqiNP_359024.1, NC_003098.1
WP_010976587.1, NC_003098.1

Genome annotation databases

EnsemblBacteriaiAAL00235; AAL00235; spr1431
GeneIDi933163
KEGGispr:spr1431
PATRICifig|171101.6.peg.1546

Similar proteinsi

Entry informationi

Entry nameiQ8DP07_STRR6
AccessioniPrimary (citable) accession number: Q8DP07
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: February 28, 2018
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health