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Q8DLM4 (Q8DLM4_THEEB) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length412 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU004247 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201 RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site761Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site3041Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1751Substrate By similarity HAMAP-Rule MF_01201
Binding site3521Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue761N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
Q8DLM4 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 629827F652FD161D

FASTA41245,153
        10         20         30         40         50         60 
MIYIESQTLS GCRVSHSLRG SYGVRIETTM LSQEQLTSSH ECERAWIEID LAALAANTRS 

        70         80         90        100        110        120 
LRQWLAPTTE LLAVVKADAY GHGALTVAQT VLAHGATWLG VATIPEGIAL RQAGITAPIL 

       130        140        150        160        170        180 
VLGSVNLPVQ VQMMAQWQLQ PTLSTPKQAL IFSDYADRLR EPLDVHLMID TGMSRLGCPW 

       190        200        210        220        230        240 
QDAVGFVQFV QRLPHLRIQG IYSHFASADD PDASLMRQQQ AYFEQVWEQI SALGLGPVRR 

       250        260        270        280        290        300 
HMANSAATLA NRSSHYDMVR IGLSLYGVYP ASHLRGVVPL RPVMQVRSRI TLLKEIPAGT 

       310        320        330        340        350        360 
GISYGHQFIA PQPMKIAVVG IGYADGVPRL LSNKLEVLVQ GKRLRQVGAI TMDQLMIDVS 

       370        380        390        400        410 
DMDGLQEGDV VTLLGEDGGD CLTVETWAEA LGTITWEILC GFKNRLPRIP VS 

« Hide

References

[1]"Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1."
Nakamura Y., Kaneko T., Sato S., Ikeuchi M., Katoh H., Sasamoto S., Watanabe A., Iriguchi M., Kawashima K., Kimura T., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Nakazaki N., Shimpo S., Sugimoto M. expand/collapse author list , Takeuchi C., Yamada M., Tabata S.
DNA Res. 9:123-130(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BP-1 EMBL BAC08012.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000039 Genomic DNA. Translation: BAC08012.1.
RefSeqNP_681250.2. NC_004113.1.

3D structure databases

ProteinModelPortalQ8DLM4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING197221.tll0460.

Proteomic databases

PRIDEQ8DLM4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAC08012; BAC08012; BAC08012.
GeneID1012702.
KEGGtel:tll0460.
PATRIC23926164. VBITheElo119873_0485.

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAITMDQLM.
OrthoDBEOG6PP9NJ.
ProtClustDBPRK00053.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8DLM4_THEEB
AccessionPrimary (citable) accession number: Q8DLM4
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: February 19, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)