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Q8DLM4

- Q8DLM4_THEEB

UniProt

Q8DLM4 - Q8DLM4_THEEB

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Protein
Alanine racemase
Gene
tll0460
Organism
Thermosynechococcus elongatus (strain BP-1)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotations

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei76 – 761Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei175 – 1751Substrate By similarityUniRule annotation
Active sitei304 – 3041Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei352 – 3521Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotations

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:tll0460Imported
OrganismiThermosynechococcus elongatus (strain BP-1)Imported
Taxonomic identifieri197221 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesThermosynechococcus
ProteomesiUP000000440: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei76 – 761N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Proteomic databases

PRIDEiQ8DLM4.

Interactioni

Protein-protein interaction databases

STRINGi197221.tll0460.

Structurei

3D structure databases

ProteinModelPortaliQ8DLM4.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0787.
HOGENOMiHOG000031444.
KOiK01775.
OMAiIYSHLAL.
OrthoDBiEOG6PP9NJ.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8DLM4-1 [UniParc]FASTAAdd to Basket

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MIYIESQTLS GCRVSHSLRG SYGVRIETTM LSQEQLTSSH ECERAWIEID    50
LAALAANTRS LRQWLAPTTE LLAVVKADAY GHGALTVAQT VLAHGATWLG 100
VATIPEGIAL RQAGITAPIL VLGSVNLPVQ VQMMAQWQLQ PTLSTPKQAL 150
IFSDYADRLR EPLDVHLMID TGMSRLGCPW QDAVGFVQFV QRLPHLRIQG 200
IYSHFASADD PDASLMRQQQ AYFEQVWEQI SALGLGPVRR HMANSAATLA 250
NRSSHYDMVR IGLSLYGVYP ASHLRGVVPL RPVMQVRSRI TLLKEIPAGT 300
GISYGHQFIA PQPMKIAVVG IGYADGVPRL LSNKLEVLVQ GKRLRQVGAI 350
TMDQLMIDVS DMDGLQEGDV VTLLGEDGGD CLTVETWAEA LGTITWEILC 400
GFKNRLPRIP VS 412
Length:412
Mass (Da):45,153
Last modified:March 1, 2003 - v1
Checksum:i629827F652FD161D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000039 Genomic DNA. Translation: BAC08012.1.
RefSeqiNP_681250.2. NC_004113.1.

Genome annotation databases

EnsemblBacteriaiBAC08012; BAC08012; BAC08012.
GeneIDi1012702.
KEGGitel:tll0460.
PATRICi23926164. VBITheElo119873_0485.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000039 Genomic DNA. Translation: BAC08012.1 .
RefSeqi NP_681250.2. NC_004113.1.

3D structure databases

ProteinModelPortali Q8DLM4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 197221.tll0460.

Proteomic databases

PRIDEi Q8DLM4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAC08012 ; BAC08012 ; BAC08012 .
GeneIDi 1012702.
KEGGi tel:tll0460.
PATRICi 23926164. VBITheElo119873_0485.

Phylogenomic databases

eggNOGi COG0787.
HOGENOMi HOG000031444.
KOi K01775.
OMAi IYSHLAL.
OrthoDBi EOG6PP9NJ.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BP-1Imported.

Entry informationi

Entry nameiQ8DLM4_THEEB
AccessioniPrimary (citable) accession number: Q8DLM4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 9, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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