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Q8DLC7 (Q8DLC7_THEEB) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:tll0569 EMBL BAC08121.1
OrganismThermosynechococcus elongatus (strain BP-1) [Reference proteome] [HAMAP] EMBL BAC08121.1
Taxonomic identifier197221 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesThermosynechococcus

Protein attributes

Sequence length940 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Binding site4521Sulfate 1 PDB 3VV4
Binding site4521Sulfate 2 PDB 3VV4
Binding site4801Sulfate 1; via amide nitrogen PDB 3VV4
Binding site4801Sulfate 2; via amide nitrogen PDB 3VV4
Binding site5121Sulfate 3 PDB 3VV4
Binding site5221Phycoviolobilin chromophore (covalent) PDB 2M7V
Binding site5331Sulfate 4 PDB 3VV4

Sequences

Sequence LengthMass (Da)Tools
Q8DLC7 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 3F51A3AB83DED993

FASTA940103,033
        10         20         30         40         50         60 
MPTMTTAKPP IDIPPLPPSV LNYQLPSVEE NKATTNGQSH GQPLPPTPPR RKFWGLRPKL 

        70         80         90        100        110        120 
ITSAIALATL PLLGVGLVGN EVVRQNLVQL VLDFQQQQAN SVALQFENYL RNRLGDARTL 

       130        140        150        160        170        180 
GSLLSSRYSD KIQRRDRPQL QAILDQWLNA YSDYDSAGII ANDGQGTVIA QSSEGNRLAN 

       190        200        210        220        230        240 
NILQNQQYFK LAIQTRNPVL TVEPTLSLPD RPLGMFLAVP VINPQNGQIL AVARLRIPRA 

       250        260        270        280        290        300 
TIAELFITYT RKQSHTFYLI DSGGTIFATT QREEAIQGKP LQEVFPKLAE QLQRARSGVI 

       310        320        330        340        350        360 
KTDATFEDQI LSYRQVPSPF RAIVLGVDRN QALAPLRTLT WTLFGGMVIA TGAVGAIALY 

       370        380        390        400        410        420 
ATQRGLRPIF RTIAAVEAIG AGNLDTRVPI ETKDELATLG QTINEMVTRL QQSFTQIEQA 

       430        440        450        460        470        480 
AKCADCLRQA AVQLSELRDR QAIFETLVAK GRELLACDRV IVYAFDDNYV GTVVAESVAE 

       490        500        510        520        530        540 
GWPQARDQVI EDPCFREHWV EAYRQGRIQA TTDIFKAGLT ECHLNQLRPL KVRANLVVPM 

       550        560        570        580        590        600 
VIDDQLFGLL IAHQCSEPRQ WQEIEIDQFS ELASTGSLVL ERLHFLEQTI AAQQAAERLA 

       610        620        630        640        650        660 
QEQQQRTEHI QMQLIKLLTE VEAASQGDLT VRADITADEI GTVADIFNAL IESLRDVVVQ 

       670        680        690        700        710        720 
VKATTEKVNT ALLADEAAMT ELATESLRQA KKVKRMLDAV EAMASSIESV ANSANEAAAV 

       730        740        750        760        770        780 
ARQASERAVT SGETMDTTVE SILQLRQTVA ETAKKVKRLG ESSQQISKVI SLINQIALQT 

       790        800        810        820        830        840 
NLLAINASIE AARAGEEGRG FAVVAEEVGE LAARSAAATR EIEQIVESIQ QETQEVVSAM 

       850        860        870        880        890        900 
EAGTAQVVEG TRLVEATKQS LAEIVQVSQH IDELVQSISQ ATVSQTRTSN TVSTLMRDFA 

       910        920        930        940 
KVSEGMSATS KQISESLQAT VDMAQELQNS VNIFKVTAEG 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1."
Nakamura Y., Kaneko T., Sato S., Ikeuchi M., Katoh H., Sasamoto S., Watanabe A., Iriguchi M., Kawashima K., Kimura T., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Nakazaki N., Shimpo S., Sugimoto M. expand/collapse author list , Takeuchi C., Yamada M., Tabata S.
DNA Res. 9:123-130(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BP-1 EMBL BAC08121.1.
[2]"Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism."
Narikawa R., Ishizuka T., Muraki N., Shiba T., Kurisu G., Ikeuchi M.
Proc. Natl. Acad. Sci. U.S.A. 110:918-923(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 430-591 IN COMPLEX WITH SULFATE.
[3]"A photo-labile thioether linkage to phycoviolobilin provides the foundation for the blue/green photocycles in DXCF-cyanobacteriochromes."
Burgie E.S., Walker J.M., Phillips G.N., Vierstra R.D.
Structure 21:88-97(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.77 ANGSTROMS) OF 430-591.
[4]"Structural and Flexibility Variations Between the Ground and Photoactivated States of a Blue/Green Light-Absorbing Cyanobacteriochrome."
Cornilescu C.C.
Submitted (MAY-2013) to the PDB data bank
Cited for: STRUCTURE BY NMR OF 430-591 IN COMPLEX WITH PHYCOVIOLOBILIN CHROMOPHORE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000039 Genomic DNA. Translation: BAC08121.1.
RefSeqNP_681359.1. NC_004113.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2M7UNMR-A430-591[»]
2M7VNMR-A430-591[»]
3VV4X-ray2.00A/B430-591[»]
4FOFX-ray2.42A430-591[»]
ProteinModelPortalQ8DLC7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING197221.tll0569.

Proteomic databases

PRIDEQ8DLC7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAC08121; BAC08121; BAC08121.
GeneID1012522.
KEGGtel:tll0569.
PATRIC23926398. VBITheElo119873_0601.

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000035243.
KOK02660.
OrthoDBEOG62NX1N.

Family and domain databases

Gene3D3.30.450.40. 1 hit.
InterProIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR016132. Phyto_chromo_attachment.
[Graphical view]
PfamPF01590. GAF. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00065. GAF. 1 hit.
SM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF55781. SSF55781. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
PS50046. PHYTOCHROME_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8DLC7_THEEB
AccessionPrimary (citable) accession number: Q8DLC7
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 9, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)