SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q8DIR2

- Q8DIR2_THEEB

UniProt

Q8DIR2 - Q8DIR2_THEEB

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Superoxide dismutase

Gene
sodB
Organism
Thermosynechococcus elongatus (strain BP-1)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi28 – 281Iron; via tele nitrogenImported
Metal bindingi80 – 801Iron; via tele nitrogenImported
Metal bindingi162 – 1621IronImported
Metal bindingi166 – 1661Iron; via tele nitrogenImported

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

IronImported, Metal-bindingImported

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
OrganismiThermosynechococcus elongatus (strain BP-1)Imported
Taxonomic identifieri197221 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesThermosynechococcus
ProteomesiUP000000440: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi197221.tll1519.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1MY6X-ray1.60A/B2-200[»]
ProteinModelPortaliQ8DIR2.
SMRiQ8DIR2. Positions 2-199.

Miscellaneous databases

EvolutionaryTraceiQ8DIR2.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013584.
KOiK04564.
OMAiWTWLVKG.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8DIR2-1 [UniParc]FASTAAdd to Basket

« Hide

MAFVQEPLPF DPGALEPYGM SAKTLEFHYG KHHKGYVDNL NKLTQDTELA    50
DKSLEDVIRT TYGDAAKVGI FNNAAQVWNH TFFWNSLKPG GGGVPTGDVA 100
ARINSAFGSY DEFKAQFKNA AATQFGSGWA WLVLEAGTLK VTKTANAENP 150
LVHGQVPLLT IDVWEHAYYL DYQNRRPDFI DNFLNQLVNW DFVAKNLAAA 200
Length:200
Mass (Da):22,216
Last modified:March 1, 2003 - v1
Checksum:i666877141AEE800B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000039 Genomic DNA. Translation: BAC09071.1.
RefSeqiNP_682309.1. NC_004113.1.

Genome annotation databases

EnsemblBacteriaiBAC09071; BAC09071; BAC09071.
GeneIDi1011132.
KEGGitel:tll1519.
PATRICi23928402. VBITheElo119873_1596.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000039 Genomic DNA. Translation: BAC09071.1 .
RefSeqi NP_682309.1. NC_004113.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1MY6 X-ray 1.60 A/B 2-200 [» ]
ProteinModelPortali Q8DIR2.
SMRi Q8DIR2. Positions 2-199.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 197221.tll1519.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAC09071 ; BAC09071 ; BAC09071 .
GeneIDi 1011132.
KEGGi tel:tll1519.
PATRICi 23928402. VBITheElo119873_1596.

Phylogenomic databases

eggNOGi COG0605.
HOGENOMi HOG000013584.
KOi K04564.
OMAi WTWLVKG.
OrthoDBi EOG63NMNT.

Miscellaneous databases

EvolutionaryTracei Q8DIR2.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
PRINTSi PR01703. MNSODISMTASE.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEi PS00088. SOD_MN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BP-1Imported.
  2. "The 1.6 A resolution structure of Fe-superoxide dismutase from the thermophilic cyanobacterium Thermosynechococcus elongatus."
    Kerfeld C.A., Yoshida S., Tran K.T., Yeates T.O., Cascio D., Bottin H., Berthomieu C., Sugiura M., Boussac A.
    J. Biol. Inorg. Chem. 8:707-714(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS) OF 2-200 IN COMPLEX WITH IRON.

Entry informationi

Entry nameiQ8DIR2_THEEB
AccessioniPrimary (citable) accession number: Q8DIR2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 9, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi