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Protein
Submitted name:

Ycf53 protein

Gene

ycf53

Organism
Thermosynechococcus elongatus (strain BP-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Ycf53 proteinImported
Gene namesi
Name:ycf53Imported
OrganismiThermosynechococcus elongatus (strain BP-1)Imported
Taxonomic identifieri197221 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesThermosynechococcus
Proteomesi
  • UP000000440 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi197221.tlr1594.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1Z3XX-ray1.50A1-235[»]
1Z3YX-ray1.70A1-235[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8DIJ1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 8483GUN4_NInterPro annotationAdd
BLAST
Domaini92 – 231140GUN4InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108N4I. Bacteria.
ENOG410XQHG. LUCA.
HOGENOMiHOG000232820.
OMAiRKWLYFT.
OrthoDBiPOG091H14ID.

Family and domain databases

InterProiIPR016024. ARM-type_fold.
IPR008629. GUN4-like.
IPR032192. GUN4_N.
[Graphical view]
PfamiPF05419. GUN4. 1 hit.
PF16416. GUN4_N. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8DIJ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTTEPALAD LQEQLYNGNE KSQLAAMSTL STAGTEGYHL LQEFLKDSAT
60 70 80 90 100
FSPPPAPWIR GQAYRLLFHS PEASVQAFLQ QHYPQGVIPL RSDRGVDYQE
110 120 130 140 150
LAKLLVAEKF EAADRLTTQK LCELAGPLAQ KRRWLYFTEV EQLPIPDLQT
160 170 180 190 200
IDQLWLAFSL GRFGYSVQRQ LWLGCGQNWD RLWEKIGWRQ GKRWPRYPNE
210 220 230
FIWDLSAPRG HLPLTNQLRG VQVLNALLNH PAWTA
Length:235
Mass (Da):26,971
Last modified:March 1, 2003 - v1
Checksum:iAAFA1F0E1B6D7DDC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000039 Genomic DNA. Translation: BAC09146.1.
RefSeqiNP_682384.1. NC_004113.1.
WP_011057433.1. NC_004113.1.

Genome annotation databases

EnsemblBacteriaiBAC09146; BAC09146; BAC09146.
GeneIDi1010678.
KEGGitel:tlr1594.
PATRICi23928558. VBITheElo119873_1672.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000039 Genomic DNA. Translation: BAC09146.1.
RefSeqiNP_682384.1. NC_004113.1.
WP_011057433.1. NC_004113.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1Z3XX-ray1.50A1-235[»]
1Z3YX-ray1.70A1-235[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi197221.tlr1594.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC09146; BAC09146; BAC09146.
GeneIDi1010678.
KEGGitel:tlr1594.
PATRICi23928558. VBITheElo119873_1672.

Phylogenomic databases

eggNOGiENOG4108N4I. Bacteria.
ENOG410XQHG. LUCA.
HOGENOMiHOG000232820.
OMAiRKWLYFT.
OrthoDBiPOG091H14ID.

Miscellaneous databases

EvolutionaryTraceiQ8DIJ1.

Family and domain databases

InterProiIPR016024. ARM-type_fold.
IPR008629. GUN4-like.
IPR032192. GUN4_N.
[Graphical view]
PfamiPF05419. GUN4. 1 hit.
PF16416. GUN4_N. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ8DIJ1_THEEB
AccessioniPrimary (citable) accession number: Q8DIJ1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: September 7, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.