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Protein

Chromophore lyase CpcS/CpeS

Gene

cpcS

Organism
Thermosynechococcus elongatus (strain BP-1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyase

Names & Taxonomyi

Protein namesi
Recommended name:
Chromophore lyase CpcS/CpeSUniRule annotation (EC:4.-.-.-UniRule annotation)
Gene namesi
Name:cpcSUniRule annotation
Ordered Locus Names:tll1699
OrganismiThermosynechococcus elongatus (strain BP-1)
Taxonomic identifieri197221 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesSynechococcaceaeThermosynechococcus
Proteomesi
  • UP000000440 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004031451 – 182Chromophore lyase CpcS/CpeSAdd BLAST182

Interactioni

Protein-protein interaction databases

STRINGi197221.tll1699.

Structurei

Secondary structure

1182
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi7 – 14Combined sources8
Beta strandi16 – 26Combined sources11
Turni27 – 30Combined sources4
Beta strandi31 – 44Combined sources14
Helixi49 – 57Combined sources9
Turni62 – 64Combined sources3
Beta strandi68 – 74Combined sources7
Beta strandi85 – 94Combined sources10
Beta strandi99 – 106Combined sources8
Beta strandi119 – 122Combined sources4
Beta strandi128 – 133Combined sources6
Beta strandi138 – 147Combined sources10
Beta strandi150 – 159Combined sources10
Beta strandi162 – 173Combined sources12

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3BDRX-ray2.80A1-182[»]
ProteinModelPortaliQ8DI91.
SMRiQ8DI91.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8DI91.

Family & Domainsi

Sequence similaritiesi

Belongs to the CpcS/CpeS biliprotein lyase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108P5B. Bacteria.
ENOG4111G1V. LUCA.
HOGENOMiHOG000232525.
OMAiYAEIVPV.
OrthoDBiPOG091H146U.

Family and domain databases

CDDicd16339. CpcS. 1 hit.
Gene3Di2.40.128.20. 1 hit.
HAMAPiMF_01459. Chrphore_lyase_CpxS. 1 hit.
InterProiView protein in InterPro
IPR012674. Calycin.
IPR018536. CpcS/CpeS.
PfamiView protein in Pfam
PF09367. CpeS. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8DI91-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCIGMDIRDF FAQSAGRWFS QRTSHHLAFK QTESGKSQLT IELLSVDDPA
60 70 80 90 100
VIALCQQYDM DPAWAVCGAR VSWDGTMEWD NEKHEGSTVL VPIMDQGSRM
110 120 130 140 150
EGKLLREMGY AEKAPVAGRF SMGSDGALTL ITEYETIYSE ERLWFASPNL
160 170 180
RLRTSILKRF GGFSMASFCS EIRLGVTQPA NS
Length:182
Mass (Da):20,363
Last modified:March 1, 2003 - v1
Checksum:i1BF78D948C8893C6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000039 Genomic DNA. Translation: BAC09251.1.
RefSeqiNP_682489.1. NC_004113.1.
WP_011057536.1. NC_004113.1.

Genome annotation databases

EnsemblBacteriaiBAC09251; BAC09251; BAC09251.
GeneIDi1011181.
KEGGitel:tll1699.
PATRICifig|197221.4.peg.1780.

Similar proteinsi

Entry informationi

Entry nameiCPXS_THEEB
AccessioniPrimary (citable) accession number: Q8DI91
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 11, 2011
Last sequence update: March 1, 2003
Last modified: August 30, 2017
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families